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INO80C

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GENERAL INFORMATION

Gene name

 INO80C

Gene description

 INO80 complex subunit C

Protein class

 Predicted intracellular proteins
Predicted membrane proteins

Predicted localization

 Intracellular,Membrane

Number of transcripts

 8
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HUMAN PROTEIN ATLAS INFORMATION

Summary

 Localized to the nucleoli (fibrillar center).

RNA cell category

 Expressed in all

Protein evidence

 Evidence at protein level

Main location

 Localized to the Nucleoli fibrillar center (supported)

DATA RELIABILITY

Reliability score

 Supported based on 1 antibody.
HPA049060
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ASSAYS
RNA expression
Human cells

RNA EXPRESSION OVERVIEW
RNA cell line category: Expressed in all
Organ
Origin
Category
Expression
Alphabetical
Cell lines sorted after organ of phenotypic resemblance.

HUMAN CELLS

Summary

 Localized to the nucleoli (fibrillar center).

Main location

 Nucleoli fibrillar center (supported)

 

 

 
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Low
High
G1
S
G2
M
N/A

Thumbnail

Antibody

Cell line

Location

Single-cell variation

Cell cycle dependent variation
HPA049060 HEK 293 Nucleoli fibrillar center
HPA049060 MCF7 Nucleoli fibrillar center
HPA049060 U-2 OS Nucleoli fibrillar center

GENE INFORMATION

Gene name

 INO80C (HGNC Symbol)

Synonyms

 C18orf37, FLJ38183, hIes6, IES6

Description

 INO80 complex subunit C (HGNC Symbol)

Entrez gene summary

Chromosome

 18

Cytoband

 q12.2

Chromosome location (bp)

 35452230 - 35497991

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000153391 (version 83.38)

Entrez gene

 125476

UniProt

 Q6PI98 (UniProt - Evidence at protein level)

neXtProt

 NX_Q6PI98

Antibodypedia

 INO80C antibodies

PROTEIN BROWSER
INO80C-001
INO80C-002
INO80C-003
INO80C-005
INO80C-008
INO80C-009
INO80C-010
INO80C-011

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
INO80C-001
ENSP00000334473
ENST00000334598
Q6PI98 [Direct mapping]
INO80 complex subunit C
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003674 [molecular_function]
GO:0005730 [nucleolus]
GO:0006281 [DNA repair]
GO:0006310 [DNA recombination]
GO:0006338 [chromatin remodeling]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0008150 [biological_process]
GO:0031011 [Ino80 complex]
GO:0071339 [MLL1 complex]
Show all
 192 aa
20.6 kDa 		No 0
INO80C-002
ENSP00000391457
ENST00000441607
Q6PI98 [Direct mapping]
INO80 complex subunit C
Show all
   MEMSAT-SVM predicted membrane proteins
   SCAMPI predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003674 [molecular_function]
GO:0005730 [nucleolus]
GO:0006281 [DNA repair]
GO:0006310 [DNA recombination]
GO:0006338 [chromatin remodeling]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0008150 [biological_process]
GO:0031011 [Ino80 complex]
GO:0071339 [MLL1 complex]
Show all
 228 aa
24.5 kDa 		No 0
INO80C-003
ENSP00000465273
ENST00000592173
Q6PI98 [Direct mapping]
INO80 complex subunit C
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003674 [molecular_function]
GO:0005730 [nucleolus]
GO:0006281 [DNA repair]
GO:0006310 [DNA recombination]
GO:0006338 [chromatin remodeling]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0008150 [biological_process]
GO:0031011 [Ino80 complex]
GO:0071339 [MLL1 complex]
Show all
 197 aa
21.1 kDa 		No 1
INO80C-005
ENSP00000467013
ENST00000587450
K7ENM4 [Direct mapping]
INO80 complex subunit C
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0006338 [chromatin remodeling]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0031011 [Ino80 complex]
Show all
 98 aa
10.1 kDa 		No 0
INO80C-008
ENSP00000467708
ENST00000590757
K7EQ79 [Direct mapping]
INO80 complex subunit C
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0006338 [chromatin remodeling]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0031011 [Ino80 complex]
Show all
 95 aa
10.1 kDa 		No 0
INO80C-009
ENSP00000464948
ENST00000586489
K7EIY8 [Direct mapping]
Chromosome 18 open reading frame 37, isoform CRA_a; INO80 complex subunit C
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0006338 [chromatin remodeling]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0031011 [Ino80 complex]
Show all
 137 aa
15.2 kDa 		No 0
INO80C-010
ENSP00000465637
ENST00000589273
K7EKI6 [Direct mapping]
INO80 complex subunit C
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
 29 aa
3.2 kDa 		No 0
INO80C-011
ENSP00000473165
ENST00000591139
M0R3E2 [Direct mapping]
INO80 complex subunit C
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0006338 [chromatin remodeling]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0031011 [Ino80 complex]
Show all
 137 aa
14.9 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.