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ANKRD29

COLON - Expression summary

RNA expression
HPA:2.3TPM
GTEx:1.8RPKM
FANTOM5:1.6Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA041272

  

Antibody HPA049419

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Not detected   High  

Peripheral nerve/ganglion

 Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

2.3
overview Male, age 54 Sample 1
TPM: 2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 2.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 3.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 2.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 4.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

1.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 2.3
Samples: 149

Max RPKM: 7.5
Min RPKM: 0.3
Std RPKM: 1.2
Median RPKM: 2.0
GTEX-145LS-2926-SM-5O99G 60-69 years, female 7.5
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 6.4
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 6.4
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 5.6
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 5.1
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 5.1
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 5.1
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 5.0
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 4.9
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 4.7
Show all
Colon - Transverse
RPKM: 1.4
Samples: 196

Max RPKM: 12.0
Min RPKM: 0.1
Std RPKM: 1.4
Median RPKM: 0.9
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 12.0
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 8.1
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 6.5
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 5.5
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 5.4
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 4.7
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 4.5
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 4.4
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 4.4
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 4.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

1.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 1.6
FF:10014-101C5 62,83,84 years, mixed 1.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.