Cell atlas - ABI3BP - The Human Protein Atlas

GENERAL INFORMATION
Gene name	ABI3BP
Gene description	ABI family, member 3 (NESH) binding protein
Protein class	Plasma proteins Predicted intracellular proteins Predicted secreted proteins
Predicted localization	Intracellular,Secreted
Number of transcripts	21
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HUMAN PROTEIN ATLAS INFORMATION
Summary	Mainly localized to the nucleoli, cytosol & nuclear speckles. In addition localized to the centrosome.
RNA cell category	Cell line enhanced (TIME, ASC TERT1)
Protein evidence	Evidence at protein level
Main location	Localized to the Nucleoli (uncertain), Nuclear speckles (uncertain), Cytosol (uncertain)
Additional location	In addition localized to the Centrosome (uncertain)

DATA RELIABILITY
Reliability score	Uncertain based on 1 antibody. HPA048456
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ASSAYS

RNA expression

Human cells

RNA EXPRESSION OVERVIEW
RNA cell line category: Cell line enhanced (TIME, ASC TERT1) Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

HUMAN CELLS

Summary

Mainly localized to the nucleoli, cytosol & nuclear speckles. In addition localized to the centrosome.

Main location

Nucleoli (uncertain), Nuclear speckles (uncertain), Cytosol (uncertain)

Additional location

Centrosome (uncertain)


	Toggle channels	Low High G1 S G2 M N/A

Antibody	Cell line	Location
HPA048456	U-2 OS	Nucleoli
		Nuclear speckles
		Cytosol
HPA048456	U-251 MG	Nucleoli
		Nuclear speckles
		Centrosome
		Cytosol

GENE INFORMATION
Gene name	ABI3BP (HGNC Symbol)
Synonyms	DKFZP586L2024, NESHBP, TARSH
Description	ABI family, member 3 (NESH) binding protein (HGNC Symbol)
Entrez gene summary
Chromosome	3
Cytoband	q12.2
Chromosome location (bp)	100749156 - 100993515
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000154175 (version 83.38)
Entrez gene	25890
UniProt	Q7Z7G0 (UniProt - Evidence at protein level)
neXtProt	NX_Q7Z7G0
Antibodypedia	ABI3BP antibodies

PROTEIN BROWSER

ABI3BP-001	ABI3BP-002	ABI3BP-006	ABI3BP-008	ABI3BP-010	ABI3BP-011	ABI3BP-013	ABI3BP-015	ABI3BP-016	ABI3BP-017	ABI3BP-018	ABI3BP-019	ABI3BP-022	ABI3BP-023	ABI3BP-026	ABI3BP-027	ABI3BP-028	ABI3BP-029	ABI3BP-030	ABI3BP-031	ABI3BP-032

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
ABI3BP-001 ENSP00000284322 ENST00000284322	Q7Z7G0 [Direct mapping] Target of Nesh-SH3 Show all	TMHMM predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Plasma proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005518 [collagen binding] GO:0005539 [glycosaminoglycan binding] GO:0005578 [proteinaceous extracellular matrix] GO:0005614 [interstitial matrix] GO:0005615 [extracellular space] GO:0008201 [heparin binding] GO:0010811 [positive regulation of cell-substrate adhesion] GO:0030198 [extracellular matrix organization] GO:0031012 [extracellular matrix] Show all	1075 aa 118.6 kDa	Yes	0
ABI3BP-002 ENSP00000420524 ENST00000471714	D3YTG3 [Direct mapping] Target of Nesh-SH3 Show all	TMHMM predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] Show all	1777 aa 195.3 kDa	Yes	0
ABI3BP-006 ENSP00000433993 ENST00000495063	Q5JPC9 [Direct mapping] ABI gene family, member 3 (NESH) binding protein, isoform CRA_d; Putative uncharacterized protein DKFZp667H216; Target of Nesh-SH3 Show all	TMHMM predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] Show all	1005 aa 110.7 kDa	Yes	0
ABI3BP-008 ENSP00000418817 ENST00000495591	H0Y897 [Direct mapping] Target of Nesh-SH3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] Show all	1131 aa 124.1 kDa	No	0
ABI3BP-010 ENSP00000418479 ENST00000483129	H7C4X4 [Direct mapping] Target of Nesh-SH3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		187 aa 20.2 kDa	No	0
ABI3BP-011 ENSP00000417325 ENST00000459682	H7C4H3 [Direct mapping] Target of Nesh-SH3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		84 aa 9.2 kDa	No	0
ABI3BP-013 ENSP00000418063 ENST00000466947	H7C4T1 [Direct mapping] Target of Nesh-SH3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		187 aa 20.6 kDa	No	0
ABI3BP-015 ENSP00000418024 ENST00000471901	H7C4S3 [Direct mapping] Target of Nesh-SH3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		308 aa 33.7 kDa	No	0
ABI3BP-016 ENSP00000417745 ENST00000478235	H7C4N5 [Direct mapping] Target of Nesh-SH3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		187 aa 20.4 kDa	No	0
ABI3BP-017 ENSP00000418800 ENST00000482765	H7C524 [Direct mapping] Target of Nesh-SH3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		158 aa 17.2 kDa	No	0
ABI3BP-018 ENSP00000420704 ENST00000497395	H7C5S3 [Direct mapping] Target of Nesh-SH3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		189 aa 20.3 kDa	No	0
ABI3BP-019 ENSP00000419029 ENST00000486770	H7C556 [Direct mapping] Target of Nesh-SH3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		233 aa 25.4 kDa	No	0
ABI3BP-022 ENSP00000436918 ENST00000530539	E9PPR9 [Direct mapping] Target of Nesh-SH3 Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] Show all	161 aa 18.1 kDa	Yes	0
ABI3BP-023 ENSP00000435319 ENST00000527258	H0YEA0 [Direct mapping] Target of Nesh-SH3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] Show all	191 aa 21.9 kDa	No	0
ABI3BP-026 ENSP00000433981 ENST00000533795	H0YDN0 [Direct mapping] Target of Nesh-SH3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		188 aa 20.8 kDa	No	0
ABI3BP-027 ENSP00000437031 ENST00000533855	H0YF18 [Direct mapping] Target of Nesh-SH3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		303 aa 32.7 kDa	No	0
ABI3BP-028 ENSP00000431537 ENST00000527943	H0YCG4 [Direct mapping] Target of Nesh-SH3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		151 aa 16.4 kDa	No	0
ABI3BP-029 ENSP00000432069 ENST00000528305	H0YCP4 [Direct mapping] Target of Nesh-SH3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		125 aa 13.4 kDa	No	0
ABI3BP-030 ENSP00000436070 ENST00000528490	H0YEL2 [Direct mapping] Target of Nesh-SH3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		187 aa 20.5 kDa	No	0
ABI3BP-031 ENSP00000434425 ENST00000534256	H0YDW0 [Direct mapping] Target of Nesh-SH3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		87 aa 9.3 kDa	No	0
ABI3BP-032 ENSP00000437308 ENST00000534413	H0YF57 [Direct mapping] Target of Nesh-SH3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		150 aa 16.4 kDa	No	0