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ENAH

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:12.6TPM
GTEx:11.7RPKM
FANTOM5:64.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA028448

  

Antibody HPA028696

  

Endothelial cells

 Medium   Medium  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Medium   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

12.6
overview Male, age 54 Sample 1
TPM: 15.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 12.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 10.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 16.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 12.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 26.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 7.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 22.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 4.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 9.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 13.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 6.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

11.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 16.6
Samples: 149

Max RPKM: 57.1
Min RPKM: 6.1
Std RPKM: 6.9
Median RPKM: 14.7
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 57.1
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 47.7
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 40.1
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 35.1
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 33.3
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 32.3
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 30.9
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 29.1
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 28.8
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 27.7
Show all
Colon - Transverse
RPKM: 8.0
Samples: 196

Max RPKM: 32.4
Min RPKM: 0.9
Std RPKM: 6.3
Median RPKM: 5.5
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 32.4
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 27.9
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 26.8
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 25.4
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 25.3
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 24.7
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 22.1
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 21.6
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 20.9
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 20.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

64.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 64.2
FF:10014-101C5 62,83,84 years, mixed 64.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.