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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:2.9TPM
GTEx:1.6RPKM
FANTOM5:11.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA028402

  

Antibody HPA043443

  

Adipocytes

 Not detected   Not detected  

Chondrocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
Chondrocytes:Not detected
 

Antibody staining

Antibody HPA028402

  

Antibody HPA043443

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  

Chondrocytes

 Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

2.9
N/A Female, age 80 Sample 1
TPM: 2.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 2.4
N/A Female, age 57 Sample 3
TPM: 2.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 2.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 4.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

1.6

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 1.8
Samples: 350

Max RPKM: 7.1
Min RPKM: 0.7
Std RPKM: 0.7
Median RPKM: 1.7
GTEX-QDT8-0226-SM-32PL4 30-39 years, female 7.1
GTEX-111VG-2326-SM-5N9BK 60-69 years, male 5.6
GTEX-13VXT-0226-SM-5LU9Q 20-29 years, female 5.4
GTEX-139TU-0226-SM-5J1NM 60-69 years, male 4.5
GTEX-13JVG-0226-SM-5J1MW 60-69 years, male 4.5
GTEX-11GSO-2326-SM-5A5LX 60-69 years, male 4.3
GTEX-12WSA-0326-SM-5BC6I 60-69 years, male 4.3
GTEX-P44H-0326-SM-2XCES 40-49 years, male 4.1
GTEX-14BIL-0226-SM-5SI9E 50-59 years, male 3.8
GTEX-13NZA-0126-SM-5K7UH 60-69 years, male 3.4
Show all
Adipose - Visceral (Omentum)
RPKM: 1.2
Samples: 227

Max RPKM: 4.1
Min RPKM: 0.3
Std RPKM: 0.4
Median RPKM: 1.2
GTEX-13FHO-2026-SM-5J1OA 60-69 years, male 4.1
GTEX-12WSG-0426-SM-5FQSE 50-59 years, female 3.0
GTEX-WOFM-0726-SM-3MJF8 20-29 years, male 2.8
GTEX-Y5V5-0226-SM-5S2N8 60-69 years, female 2.5
GTEX-ZF29-0826-SM-5S2NP 60-69 years, female 2.5
GTEX-13X6I-1526-SM-5SIAC 60-69 years, male 2.3
GTEX-117YW-0826-SM-5H11O 50-59 years, male 2.2
GTEX-WFJO-1026-SM-3GIKL 30-39 years, male 2.1
GTEX-13O3P-0926-SM-5IFFI 50-59 years, male 2.0
GTEX-13OVH-1126-SM-5K7YP 70-79 years, male 2.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

11.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 11.9
FF:10010-101C1 65,65,76 years, mixed 11.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.