Tissue expression of AK9 - Staining in adipose tissue - The Human Protein Atlas

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AK9

TISSUE

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CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA ADIPOSE TISSUE

GENE/PROTEIN

Antibody validation

Dictionary
	Soft tissue


Tissue proteome
	Adipose

SOFT TISSUE - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	3.8	TPM
GTEx:	0.6	RPKM
FANTOM5:	5.2	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Fibroblasts:	Medium
Peripheral nerve:	High
Chondrocytes:	Medium

Antibody staining	Antibody HPA030804		Antibody HPA030805		Antibody HPA031779		Antibody HPA031781		Antibody HPA036324		Antibody HPA036711
Adipocytes	Medium		Low		Medium		Low		Medium		Not detected
Fibroblasts	Not detected		Medium		Not detected		Medium		Medium		Not detected
Peripheral nerve	Low		Medium		High		Not detected
Chondrocytes	Low		Medium		Medium

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Chondrocytes:	High
Fibroblasts:	High
Peripheral nerve:	Medium
Adipocytes:	Not available

Antibody staining	Antibody HPA030804		Antibody HPA030805		Antibody HPA031779		Antibody HPA031781		Antibody HPA036324		Antibody HPA036711
Chondrocytes	Medium		Medium		High		Medium
Fibroblasts	Medium		Low		Low		Medium		High		Not detected
Peripheral nerve	Medium		High		Medium		Medium		Medium		Low
Adipocytes	Medium		Medium		Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	3.8

N/A

Female, age 80

Sample 1
TPM: 4.1

Cell types%

Adipocytes: 95
Other cell types: 5

N/A

Female, age 45

Sample 2
TPM: 5.5

N/A

Female, age 57

Sample 3
TPM: 4.7

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 74

Sample 4
TPM: 3

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 59

Sample 5
TPM: 1.9

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	0.6

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 0.7

Samples: 350

Max RPKM: 1.4
Min RPKM: 0.2
Std RPKM: 0.1
Median RPKM: 0.7

GTEX-UTHO-0426-SM-5SI7N

60-69 years, male

1.4

GTEX-11TTK-0226-SM-5N9EC

60-69 years, female

1.3

GTEX-13NZ9-0526-SM-5J1OX

50-59 years, male

1.3

GTEX-U3ZN-2626-SM-3DB7T

30-39 years, female

1.3

GTEX-POYW-0726-SM-2XCEO

60-69 years, male

1.2

GTEX-11EQ8-0226-SM-5EQ5G

60-69 years, male

1.1

GTEX-1314G-1626-SM-5EQ67

30-39 years, male

1.1

GTEX-139T8-0226-SM-5L3EA

60-69 years, male

1.1

GTEX-13PDP-0226-SM-5K7W9

60-69 years, male

1.1

GTEX-NFK9-0326-SM-3MJGV

40-49 years, male

1.1

Show all

Adipose - Visceral (Omentum)
RPKM: 0.6

Samples: 227

Max RPKM: 1.2
Min RPKM: 0.1
Std RPKM: 0.2
Median RPKM: 0.5

GTEX-14A6H-1026-SM-5SIAZ

30-39 years, male

1.2

GTEX-X585-2526-SM-4QAS1

50-59 years, male

1.2

GTEX-12584-2126-SM-5FQUM

40-49 years, male

1.1

GTEX-VUSG-1426-SM-3GIJN

50-59 years, male

1.1

GTEX-ZE7O-1526-SM-5J1NH

50-59 years, female

1.1

GTEX-139YR-0326-SM-5J1MC

50-59 years, male

1.0

GTEX-13JUV-0626-SM-5J1MQ

40-49 years, female

1.0

GTEX-13NYS-0726-SM-5J1OR

60-69 years, male

1.0

GTEX-13PDP-1226-SM-5K7TW

60-69 years, male

1.0

GTEX-14BIN-1226-SM-5S2OM

50-59 years, female

1.0

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	5.2

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 5.2

65,65,76 years, mixed

5.2

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.