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ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:4.9TPM
GTEx:0.5RPKM
FANTOM5:6.2Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:High
 

Antibody staining

Antibody HPA030804

  

Antibody HPA030805

  

Antibody HPA031779

  

Antibody HPA031781

  

Antibody HPA036324

  

Antibody HPA036711

  

Squamous epithelial cells

 Medium   High   Not detected   Medium   High   High  
           
           
           

ESOPHAGUS - HPA RNA-seq

Average TPM

4.9
overview Female, age 70 Sample 1
TPM: 3.2
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 6.1
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 5.3
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

0.5

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 0.5
Samples: 286

Max RPKM: 1.0
Min RPKM: 0.1
Std RPKM: 0.1
Median RPKM: 0.5
GTEX-11DYG-1326-SM-5N9DO 60-69 years, male 1.0
GTEX-S32W-0926-SM-4AD5X 50-59 years, female 0.9
GTEX-X585-1226-SM-46MW7 50-59 years, male 0.9
GTEX-11DZ1-2026-SM-5A5KG 50-59 years, male 0.8
GTEX-13X6I-1026-SM-5LU4C 60-69 years, male 0.8
GTEX-R45C-1226-SM-48FEE 60-69 years, female 0.8
GTEX-UJHI-0826-SM-4IHLM 50-59 years, female 0.8
GTEX-V955-1126-SM-4JBH3 60-69 years, male 0.8
GTEX-XGQ4-1526-SM-4AT6H 50-59 years, male 0.8
GTEX-ZF2S-1226-SM-4WWAX 50-59 years, female 0.8
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

6.2

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 6.2
FF:10015-101C6 68,74,75 years, mixed 6.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.