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RPUSD3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:16.8TPM
GTEx:8.0RPKM
FANTOM5:21.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA037551

  

Antibody HPA037552

  

Endothelial cells

 Not detected   Low  

Glandular cells

 Not detected   Low  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   

COLON - HPA RNA-seq

Average TPM

16.8
overview Male, age 54 Sample 1
TPM: 15.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 13.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 12.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 12.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 10.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 24.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 20.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 17.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 17.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 22.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 18.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 20.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 13.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 8.3
Samples: 149

Max RPKM: 11.9
Min RPKM: 4.1
Std RPKM: 1.5
Median RPKM: 8.2
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 11.9
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 11.3
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 11.1
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 11.1
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 11.0
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 11.0
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 10.6
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 10.5
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 10.3
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 10.3
Show all
Colon - Transverse
RPKM: 7.7
Samples: 196

Max RPKM: 12.0
Min RPKM: 1.6
Std RPKM: 1.5
Median RPKM: 7.6
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 12.0
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 11.7
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 11.4
GTEX-1128S-1626-SM-5H12O 60-69 years, female 10.8
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 10.8
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 10.7
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 10.6
GTEX-P78B-1726-SM-3P5ZV 40-49 years, female 10.5
GTEX-S4P3-1226-SM-4AD4Y 50-59 years, female 10.3
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 10.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

21.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 21.8
FF:10014-101C5 62,83,84 years, mixed 21.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.