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SLC35B2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:26.5TPM
GTEx:20.6RPKM
FANTOM5:28.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA029638

  

Endothelial cells

 Low  

Glandular cells

 High  

Peripheral nerve/ganglion

 Not detected  
 
 

COLON - HPA RNA-seq

Average TPM

26.5
overview Male, age 54 Sample 1
TPM: 32.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 19.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 20.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 18.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 18.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 31.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 33.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 27.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 26.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 30.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 32
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 30.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 22.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

20.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 18.8
Samples: 149

Max RPKM: 25.1
Min RPKM: 7.1
Std RPKM: 2.9
Median RPKM: 18.9
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 25.1
GTEX-12696-1926-SM-5EGJT 60-69 years, male 23.6
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 23.5
GTEX-111CU-1226-SM-5EGIN 50-59 years, male 23.2
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 23.2
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 23.1
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 23.1
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 22.9
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 22.8
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 22.7
Show all
Colon - Transverse
RPKM: 21.9
Samples: 196

Max RPKM: 33.4
Min RPKM: 8.4
Std RPKM: 4.1
Median RPKM: 21.4
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 33.4
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 32.5
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 31.5
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 31.5
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 30.6
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 30.3
GTEX-QMRM-1226-SM-447C6 50-59 years, male 30.0
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 30.0
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 29.9
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 29.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

28.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 28.4
FF:10014-101C5 62,83,84 years, mixed 28.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.