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ACTC1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1.0TPM
GTEx:1.7RPKM
FANTOM5:0.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA041264

  

Antibody HPA041271

  

Antibody CAB003761

  

Antibody CAB037330

  

Endothelial cells

 High   High   Low   Low  

Glandular cells

 Medium   Medium   Low   Not detected  

Peripheral nerve/ganglion

 High   Not detected   Low  
       
       
       

COLON - HPA RNA-seq

Average TPM

1.0
overview Male, age 54 Sample 1
TPM: 0.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 7.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 3.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

1.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.8
Samples: 149

Max RPKM: 22.4
Min RPKM: 0.1
Std RPKM: 2.3
Median RPKM: 1.3
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 22.4
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 11.5
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 8.2
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 7.4
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 7.3
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 6.4
GTEX-13PVR-1726-SM-5Q5EC 60-69 years, female 5.8
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 5.4
GTEX-YF7O-1626-SM-5IFII 50-59 years, male 4.8
GTEX-X4EO-2726-SM-4E3HS 60-69 years, female 4.3
Show all
Colon - Transverse
RPKM: 1.6
Samples: 196

Max RPKM: 36.3
Min RPKM: 0.0
Std RPKM: 3.9
Median RPKM: 0.7
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 36.3
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 33.7
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 19.0
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 13.9
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 11.2
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 6.5
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 6.2
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 6.1
GTEX-XGQ4-1226-SM-4AT67 50-59 years, male 5.6
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 5.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

0.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 0.0
FF:10014-101C5 62,83,84 years, mixed 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.