Tissue expression of ACTC1 - Staining in skin - The Human Protein Atlas

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ACTC1

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TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA SKIN

GENE/PROTEIN

Antibody validation

Dictionary
	Skin
	Anal skin


Tissue proteome
	Skin
	Extended skin samples

SKIN - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	0.2	TPM
GTEx:	2.9	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Not detected
Keratinocytes:	Not detected
Langerhans:	Not detected
Melanocytes:	Not detected

Antibody staining	Antibody HPA041264		Antibody HPA041271		Antibody CAB003761		Antibody CAB037330
Fibroblasts	Medium		Not detected		Not detected		Not detected
Keratinocytes	Medium		Not detected		Not detected		Not detected
Langerhans	Medium		Not detected		Not detected		Not detected
Melanocytes	Medium		Not detected		Not detected		Not detected

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	Not detected

Antibody staining	Antibody HPA041264		Antibody HPA041271		Antibody CAB003761		Antibody CAB037330
Epidermal cells	Medium		Not detected		Not detected		Low

SKIN - HPA RNA-seq

Average TPM	0.2

overview

Female, age 34

Sample 1
TPM: 0.2

Cell types%

Keratinocytes: 60
Other cell types: 40

overview

Female, age 30

Sample 2
TPM: 0

Cell types%

Keratinocytes: 55
Other cell types: 45

N/A

Male, age 57

Sample 3
TPM: 0.3

SKIN - GTEx RNA-seq

Average RPKM	2.9

GTEx sample id

Sample description

RPKM

Skin - Not Sun Exposed (Suprapubic)
RPKM: 1.5

Samples: 250

Max RPKM: 15.6
Min RPKM: 0.0
Std RPKM: 2.1
Median RPKM: 0.8

GTEX-ZTTD-2826-SM-4YCFA

50-59 years, male

15.6

GTEX-XPVG-2126-SM-4B667

50-59 years, male

15.0

GTEX-WI4N-2726-SM-3LK7Y

40-49 years, female

14.9

GTEX-XMD2-2126-SM-4YCF8

60-69 years, female

9.8

GTEX-13X6K-0626-SM-5LU5D

60-69 years, female

8.4

GTEX-WFG7-2026-SM-5SI7P

20-29 years, male

8.1

GTEX-WFON-1926-SM-3LK7L

40-49 years, male

7.0

GTEX-11EI6-2826-SM-5H11D

60-69 years, male

6.7

GTEX-WYVS-1626-SM-3NM9R

40-49 years, female

6.6

GTEX-ZVT4-2426-SM-5GIEI

50-59 years, female

5.9

Show all

Skin - Sun Exposed (Lower leg)
RPKM: 3.9

Samples: 357

Max RPKM: 65.9
Min RPKM: 0.0
Std RPKM: 7.1
Median RPKM: 1.8

GTEX-SUCS-1926-SM-32PM3

70-79 years, male

65.9

GTEX-147F4-0226-SM-5QGPW

50-59 years, male

55.9

GTEX-ZVT4-0126-SM-51MS1

50-59 years, female

37.2

GTEX-145LT-1726-SM-5QGP3

40-49 years, male

36.5

GTEX-ZUA1-0126-SM-5GU76

40-49 years, male

31.8

GTEX-131XG-2626-SM-5KM17

50-59 years, female

31.7

GTEX-13PVQ-0126-SM-5SIB4

50-59 years, male

30.6

GTEX-139TT-0126-SM-5K7Y5

60-69 years, male

29.4

GTEX-OXRO-0126-SM-2YUN4

60-69 years, female

27.6

GTEX-OOBK-0126-SM-2YUND

40-49 years, male

27.2

Show all

SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.