Fields »
ABOUT
HELP
BLOG
PTMS

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:81.8TPM
GTEx:152.2RPKM
FANTOM5:346.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Medium
Fibroblasts:Medium
Peripheral nerve:High
 
 

Antibody staining

Antibody HPA038186

  

Chondrocytes

 Medium  

Fibroblasts

 Medium  

Peripheral nerve

 High  
    
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Chondrocytes:High
Fibroblasts:Low
Peripheral nerve:High
 

Antibody staining

Antibody HPA038186

  

Adipocytes

 High  

Chondrocytes

 High  

Fibroblasts

 Low  

Peripheral nerve

 High  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

81.8
N/A Female, age 80 Sample 1
TPM: 174
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 47.7
N/A Female, age 57 Sample 3
TPM: 81.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 60.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 44.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

152.2

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 148.3
Samples: 350

Max RPKM: 309.7
Min RPKM: 56.0
Std RPKM: 46.2
Median RPKM: 143.8
GTEX-XMD2-0226-SM-4WWEE 60-69 years, female 309.7
GTEX-XYKS-2726-SM-4E3IC 60-69 years, female 283.7
GTEX-13OW6-0526-SM-5L3HY 50-59 years, male 278.3
GTEX-139T4-0126-SM-5HL5G 50-59 years, female 270.6
GTEX-1314G-1626-SM-5EQ67 30-39 years, male 270.2
GTEX-13G51-2626-SM-5LZYW 60-69 years, male 266.8
GTEX-11DXW-0326-SM-5H11W 40-49 years, male 263.0
GTEX-11DZ1-0226-SM-5A5KF 50-59 years, male 262.3
GTEX-11EQ8-0226-SM-5EQ5G 60-69 years, male 254.5
GTEX-XQ8I-0526-SM-4BOPS 50-59 years, male 249.9
Show all
Adipose - Visceral (Omentum)
RPKM: 158.2
Samples: 227

Max RPKM: 383.3
Min RPKM: 59.2
Std RPKM: 47.2
Median RPKM: 152.9
GTEX-13IVO-2426-SM-5K7V9 70-79 years, male 383.3
GTEX-13PDP-1226-SM-5K7TW 60-69 years, male 334.4
GTEX-13NZ9-2026-SM-5KM1U 50-59 years, male 287.3
GTEX-YJ89-1926-SM-5IFJ6 60-69 years, male 276.4
GTEX-13S86-0926-SM-5SI6I 40-49 years, male 275.2
GTEX-12WSC-1726-SM-5GCN3 50-59 years, male 271.1
GTEX-1212Z-0526-SM-5FQSQ 60-69 years, male 267.2
GTEX-13OW7-1126-SM-5K7V6 50-59 years, male 251.7
GTEX-11DYG-2026-SM-5EGGX 60-69 years, male 250.6
GTEX-UPK5-1826-SM-3GAEB 40-49 years, male 249.2
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

346.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 346.6
FF:10010-101C1 65,65,76 years, mixed 346.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.