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EIF4A1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:246.9TPM
GTEx:112.1RPKM
FANTOM5:54.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody CAB011689

  

Endothelial cells

 Not detected  

Glandular cells

 High  

Peripheral nerve/ganglion

 Not detected  
 

COLON - HPA RNA-seq

Average TPM

246.9
overview Male, age 54 Sample 1
TPM: 183.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 190
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 254.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 181.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 214.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 338.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 396
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 272.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 233
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 317
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 210.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 225.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 193.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

112.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 106.5
Samples: 149

Max RPKM: 326.4
Min RPKM: 49.2
Std RPKM: 48.8
Median RPKM: 94.5
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 326.4
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 315.3
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 280.7
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 242.7
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 224.7
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 212.7
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 209.8
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 205.2
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 203.4
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 200.3
Show all
Colon - Transverse
RPKM: 116.4
Samples: 196

Max RPKM: 290.4
Min RPKM: 42.7
Std RPKM: 42.3
Median RPKM: 102.2
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 290.4
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 278.8
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 260.8
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 240.4
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 238.3
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 236.6
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 223.8
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 210.6
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 208.6
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 208.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

54.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 54.1
FF:10014-101C5 62,83,84 years, mixed 54.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.