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TBC1D24

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:2.1TPM
GTEx:2.8RPKM
FANTOM5:4.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA044712

  

Endothelial cells

 Not detected  

Glandular cells

 Low  

Peripheral nerve/ganglion

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

2.1
overview Male, age 54 Sample 1
TPM: 3.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 2.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 1.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 2.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 2.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

2.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 3.2
Samples: 149

Max RPKM: 6.4
Min RPKM: 1.4
Std RPKM: 0.9
Median RPKM: 3.1
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 6.4
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 5.5
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 5.2
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 4.9
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 4.9
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 4.8
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 4.8
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 4.8
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 4.8
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 4.7
Show all
Colon - Transverse
RPKM: 2.4
Samples: 196

Max RPKM: 5.5
Min RPKM: 0.9
Std RPKM: 0.8
Median RPKM: 2.3
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 5.5
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 4.7
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 4.6
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 4.4
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 4.3
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 4.3
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 4.2
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 4.1
GTEX-11GSP-1626-SM-5986N 60-69 years, female 3.9
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 3.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

4.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 4.4
FF:10014-101C5 62,83,84 years, mixed 4.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.