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TTC9C

GENERAL INFORMATION

Gene name

 TTC9C

Gene description

 Tetratricopeptide repeat domain 9C

Protein class

 Predicted intracellular proteins

Predicted localization

 Intracellular

Number of transcripts

 3
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Expressed in all
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

 Evidence at protein level

Protein expression

 Cytoplasmic expression in all tissues.

DATA RELIABILITY

Data reliability
description

 Antibody staining mainly consistent with RNA expression data. Pending external verification.

Reliability score

 Approved based on 1 antibody.
HPA055169
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RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
Caudate
N/A
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Bronchus
N/A
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Vagina
N/A
Adipose & soft tissue
Skin
Cerebral cortex

Tonsil

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW
Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

 TTC9C (HGNC Symbol)

Synonyms

 MGC29649

Description

 Tetratricopeptide repeat domain 9C (HGNC Symbol)

Entrez gene summary

Chromosome

 11

Cytoband

 q12.3

Chromosome location (bp)

 62728069 - 62740293

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000162222 (version 83.38)

Entrez gene

 283237

UniProt

 Q8N5M4 (UniProt - Evidence at protein level)

neXtProt

 NX_Q8N5M4

Antibodypedia

 TTC9C antibodies

PROTEIN BROWSER
TTC9C-001
TTC9C-002
TTC9C-004

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
TTC9C-001
ENSP00000325266
ENST00000316461
Q8N5M4 [Direct mapping]
Tetratricopeptide repeat protein 9C
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000413 [protein peptidyl-prolyl isomerization]
GO:0003755 [peptidyl-prolyl cis-trans isomerase activity]
GO:0005515 [protein binding]
GO:0005528 [FK506 binding]
GO:0005737 [cytoplasm]
GO:0005789 [endoplasmic reticulum membrane]
GO:0061077 [chaperone-mediated protein folding]
Show all
 171 aa
20 kDa 		No 0
TTC9C-002
ENSP00000434340
ENST00000532583
Q8N5M4 [Direct mapping]
Tetratricopeptide repeat protein 9C
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000413 [protein peptidyl-prolyl isomerization]
GO:0003755 [peptidyl-prolyl cis-trans isomerase activity]
GO:0005515 [protein binding]
GO:0005528 [FK506 binding]
GO:0005737 [cytoplasm]
GO:0005789 [endoplasmic reticulum membrane]
GO:0061077 [chaperone-mediated protein folding]
Show all
 171 aa
20 kDa 		No 0
TTC9C-004
ENSP00000435282
ENST00000530625
E9PKV8 [Direct mapping]
Tetratricopeptide repeat protein 9C
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000413 [protein peptidyl-prolyl isomerization]
GO:0003755 [peptidyl-prolyl cis-trans isomerase activity]
GO:0005515 [protein binding]
GO:0005528 [FK506 binding]
GO:0005737 [cytoplasm]
GO:0005789 [endoplasmic reticulum membrane]
GO:0061077 [chaperone-mediated protein folding]
Show all
 140 aa
16.3 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.