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SDC3

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:33.3TPM
GTEx:11.7RPKM
FANTOM5:43.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA017087

  

Antibody CAB025786

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Low  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody HPA017087

  

Antibody CAB025786

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Low   Low  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

33.3
N/A Female, age 80 Sample 1
TPM: 31.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 18.2
N/A Female, age 57 Sample 3
TPM: 17.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 41.7
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 57.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

11.7

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 11.2
Samples: 350

Max RPKM: 30.9
Min RPKM: 3.2
Std RPKM: 3.7
Median RPKM: 10.7
GTEX-11EMC-2826-SM-5PNY6 60-69 years, female 30.9
GTEX-13OW6-0526-SM-5L3HY 50-59 years, male 30.0
GTEX-1269C-2726-SM-5EGJ4 60-69 years, female 23.5
GTEX-11H98-0226-SM-5NQ89 50-59 years, male 22.7
GTEX-RU72-1026-SM-46MUG 50-59 years, female 21.5
GTEX-Q734-1826-SM-2I3EL 40-49 years, female 20.3
GTEX-12KS4-0426-SM-5EQMC 30-39 years, male 19.6
GTEX-12ZZX-0226-SM-5DUXU 40-49 years, female 19.5
GTEX-X4XY-0326-SM-46MVZ 60-69 years, male 19.1
GTEX-S7SE-0226-SM-2XCD4 50-59 years, male 18.9
Show all
Adipose - Visceral (Omentum)
RPKM: 12.5
Samples: 227

Max RPKM: 28.3
Min RPKM: 5.1
Std RPKM: 3.7
Median RPKM: 11.7
GTEX-13FHO-2026-SM-5J1OA 60-69 years, male 28.3
GTEX-ZYFC-1826-SM-5GZZA 50-59 years, male 27.8
GTEX-131XE-2026-SM-5LZW1 50-59 years, male 24.6
GTEX-13U4I-1726-SM-5J1MF 40-49 years, female 23.6
GTEX-ZE9C-1326-SM-5S2OW 60-69 years, male 23.0
GTEX-13N11-1826-SM-5IJDS 50-59 years, female 22.4
GTEX-ZPU1-1226-SM-5HL71 40-49 years, male 21.8
GTEX-XYKS-1826-SM-4E3JV 60-69 years, female 20.5
GTEX-12ZZX-1726-SM-5BC63 40-49 years, female 20.4
GTEX-13OVJ-0926-SM-5K7U1 50-59 years, female 20.2
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

43.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 43.2
FF:10010-101C1 65,65,76 years, mixed 43.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.