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SDC3

CEREBRAL CORTEX - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:136.8TPM
GTEx:38.3RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Medium
Neuronal cells:Low
Neuropil:Low
 

Antibody staining

Antibody HPA017087

  

Antibody CAB025786

  

Endothelial cells

 Not detected   Low  

Glial cells

 Medium   Not detected  

Neuronal cells

 Low   Not detected  

Neuropil

 Low   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

136.8
N/A Male, age 5 Sample 1
TPM: 120.2
overview Female, age 40 Sample 2
TPM: 196.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70 Sample 3
TPM: 93.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

38.3

GTEx sample id

Sample description

RPKM
Brain - Cortex
RPKM: 39.5
Samples: 114

Max RPKM: 68.5
Min RPKM: 11.5
Std RPKM: 7.9
Median RPKM: 39.6
GTEX-1445S-3026-SM-5O9BR 60-69 years, male 68.5
GTEX-13JUV-2926-SM-5LZX7 40-49 years, female 59.6
GTEX-131XW-3126-SM-5LZUC 50-59 years, female 55.4
GTEX-12WSD-3126-SM-5HL7P 60-69 years, female 53.0
GTEX-11GSP-3226-SM-5986O 60-69 years, female 52.3
GTEX-R55F-1326-SM-5S2V4 50-59 years, male 51.5
GTEX-14ASI-3026-SM-5S2PN 60-69 years, male 50.4
GTEX-1399T-3026-SM-5KLZC 60-69 years, male 50.3
GTEX-WHSE-3026-SM-3P5ZH 20-29 years, male 50.0
GTEX-12126-1026-SM-5P9JJ 20-29 years, male 48.8
Show all
Brain - Frontal Cortex (BA9)
RPKM: 37.2
Samples: 108

Max RPKM: 68.5
Min RPKM: 22.1
Std RPKM: 8.5
Median RPKM: 35.1
GTEX-13QJC-0011-R10a-SM-5SI63 60-69 years, female 68.5
GTEX-1445S-0011-R10a-SM-5PNWB 60-69 years, male 65.3
GTEX-13FLV-0011-R10b-SM-5LZZ2 50-59 years, male 55.9
GTEX-X261-0011-R10B-SM-4E3JT 50-59 years, male 54.7
GTEX-13OVJ-0011-R10b-SM-5L3HT 50-59 years, female 52.0
GTEX-11WQC-0011-R10a-SM-57WCT 60-69 years, male 51.0
GTEX-13OVL-0011-R10a-SM-5L3GS 50-59 years, male 50.8
GTEX-T5JC-0011-R10A-SM-32PM2 20-29 years, male 50.4
GTEX-13JUV-0011-R10b-SM-5LZXR 40-49 years, female 50.2
GTEX-145LU-0011-R10a-SM-5PNWJ 50-59 years, male 49.5
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.