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DIRAS3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:0.7TPM
GTEx:2.0RPKM
FANTOM5:3.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA028483

  

Antibody HPA028557

  

Antibody HPA029384

  

Endothelial cells

 Medium   Low   Low  

Glandular cells

 Medium   High   Medium  

Peripheral nerve/ganglion

 Medium   High   Low  
     
     
     

COLON - HPA RNA-seq

Average TPM

0.7
overview Male, age 54 Sample 1
TPM: 1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

2.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 2.8
Samples: 149

Max RPKM: 7.0
Min RPKM: 0.5
Std RPKM: 1.1
Median RPKM: 2.7
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 7.0
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 6.5
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 5.9
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 5.6
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 5.5
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 5.5
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 5.0
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 4.9
GTEX-12WSD-2626-SM-5EGJE 60-69 years, female 4.7
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 4.7
Show all
Colon - Transverse
RPKM: 1.4
Samples: 196

Max RPKM: 6.0
Min RPKM: 0.3
Std RPKM: 1.0
Median RPKM: 1.0
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 6.0
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 5.7
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 5.2
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 5.1
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 3.6
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 3.5
GTEX-Y114-1526-SM-4TT79 50-59 years, female 3.5
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 3.5
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 3.4
GTEX-11GSP-1626-SM-5986N 60-69 years, female 3.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

3.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 3.4
FF:10014-101C5 62,83,84 years, mixed 3.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.