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SMALL INTESTINE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:7.8TPM
GTEx:3.8RPKM
FANTOM5:166.8Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA006111

  

Antibody HPA008884

  

Glandular cells

 High   Low  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

7.8
overview Male, age 65 Sample 1
TPM: 5.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 7.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 8.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 9.1

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

3.8

GTEx sample id

Sample description

RPKM
Small Intestine - Terminal Ileum
RPKM: 3.8
Samples: 88

Max RPKM: 9.5
Min RPKM: 1.2
Std RPKM: 1.9
Median RPKM: 3.0
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 9.5
GTEX-117YX-0326-SM-5GICL 50-59 years, male 8.6
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 8.3
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 7.9
GTEX-1192X-2526-SM-59868 50-59 years, male 7.7
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 7.5
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 7.4
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 7.4
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 7.3
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 7.2
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

166.8

FANTOM5 sample id

Sample description

Tags Per Million
Small intestine
Tags Per Million: 166.8
FF:10024-101D6 15,40,85 years, mixed 166.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.