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FAM102B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:13.5TPM
GTEx:5.0RPKM
FANTOM5:18.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA028451

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

13.5
overview Male, age 54 Sample 1
TPM: 18.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 17.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 11.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 13.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 9.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 9.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 12.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 13.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 11.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 16.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 19.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 14.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 7.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 4.1
Samples: 149

Max RPKM: 8.1
Min RPKM: 0.9
Std RPKM: 1.5
Median RPKM: 3.9
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 8.1
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 8.0
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 7.9
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 7.7
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 7.7
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 7.4
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 7.2
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 7.2
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 6.7
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 6.6
Show all
Colon - Transverse
RPKM: 5.6
Samples: 196

Max RPKM: 12.0
Min RPKM: 1.4
Std RPKM: 1.9
Median RPKM: 5.7
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 12.0
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 11.5
GTEX-144GM-1226-SM-5LU52 20-29 years, male 11.3
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 10.6
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 10.6
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 10.4
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 9.8
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 9.8
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 9.7
GTEX-139YR-2126-SM-5KM11 50-59 years, male 9.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

18.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 18.0
FF:10014-101C5 62,83,84 years, mixed 18.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.