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ESOPHAGUS - Expression summary

RNA expression
HPA:6.6TPM
GTEx:8.8RPKM
FANTOM5:11.8Tags Per Million

ESOPHAGUS - Annotated protein expression
 

Antibody staining

Antibody HPA027043

  

Squamous epithelial cells

 Not detected  
 
 

ESOPHAGUS - HPA RNA-seq

Average TPM

6.6
overview Female, age 70 Sample 1
TPM: 6.7
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 7.2
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 5.9
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

8.8

GTEx sample id

Sample description

RPKM
6.88.410.42.215.5024681012141618
Esophagus - Mucosa
RPKM: 8.8
Samples: 286

Max RPKM: 18.5
Min RPKM: 2.2
Std RPKM: 2.9
Median RPKM: 8.4
GTEX-PSDG-1326-SM-48TD2 50-59 years, male 18.5
GTEX-139TU-1226-SM-5J2NL 60-69 years, male 18.3
GTEX-132Q8-1826-SM-5EGIY 60-69 years, male 18.1
GTEX-12ZZX-1326-SM-5DUWI 40-49 years, female 17.9
GTEX-ZF3C-1626-SM-4WWB4 50-59 years, female 17.3
GTEX-ZVE2-1326-SM-5NQ94 50-59 years, male 17.2
GTEX-Y111-1626-SM-57WCY 50-59 years, male 16.9
GTEX-UPK5-1226-SM-4IHL8 40-49 years, male 16.8
GTEX-139UW-1126-SM-5IJEJ 60-69 years, male 16.7
GTEX-13O3Q-0826-SM-5IFGF 50-59 years, male 15.5
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

11.8

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 11.8
FF:10015-101C6 68,74,75 years, mixed 11.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.