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ESOPHAGUS - Expression summary

RNA expression
HPA:7.5TPM
GTEx:1.5RPKM
FANTOM5:7.1Tags Per Million

ESOPHAGUS - Annotated protein expression
 

Antibody staining

Antibody HPA028560

  

Squamous epithelial cells

 Low  
 
 
 

ESOPHAGUS - HPA RNA-seq

Average TPM

7.5
overview Female, age 70 Sample 1
TPM: 8.7
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 11.1
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 2.8
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

1.5

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 1.5
Samples: 286

Max RPKM: 3.8
Min RPKM: 0.4
Std RPKM: 0.6
Median RPKM: 1.4
GTEX-ZF3C-1626-SM-4WWB4 50-59 years, female 3.8
GTEX-Y111-1626-SM-57WCY 50-59 years, male 3.7
GTEX-12WSA-1426-SM-5EGJU 60-69 years, male 3.6
GTEX-P78B-1026-SM-3NMC4 40-49 years, female 3.6
GTEX-11DZ1-2026-SM-5A5KG 50-59 years, male 3.5
GTEX-132Q8-1826-SM-5EGIY 60-69 years, male 3.5
GTEX-PSDG-1326-SM-48TD2 50-59 years, male 3.4
GTEX-ZZPT-1426-SM-5N9C5 50-59 years, male 3.4
GTEX-144FL-2726-SM-5O98Z 50-59 years, male 3.2
GTEX-ZAB4-1126-SM-5HL86 40-49 years, male 3.1
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

7.1

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 7.1
FF:10015-101C6 68,74,75 years, mixed 7.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.