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TRIM46

GENERAL INFORMATION

Gene name

 TRIM46

Gene description

 Tripartite motif containing 46

Protein class

 Predicted intracellular proteins

Predicted localization

 Intracellular

Number of transcripts

 8
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Tissue enhanced (cerebral cortex)
GTEx:Tissue enhanced (cerebellum)
FANTOM5:Tissue enhanced (caudate, cerebellum)

Protein evidence

 Evidence at protein level

Protein expression

 Estimation of protein expression could not be performed. View primary data.

DATA RELIABILITY

Data reliability
description

 RNA-based expert annotation gave inconclusive results. Pending external verification.

Reliability score

 Uncertain based on 1 antibody.
HPA030389
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RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
N/A
Hippocampus
N/A
N/A
Caudate
N/A
N/A
Cerebellum
N/A
N/A
Endocrine tissues
N/A
Bone marrow & immune system
N/A
Appendix
N/A
Tonsil
N/A
Spleen
N/A
Muscle tissues
N/A
Lung
N/A
Nasopharynx
N/A
N/A
Bronchus
N/A
N/A
Lung
N/A
Liver & gallbladder
N/A
Liver
N/A
Pancreas
N/A
Pancreas
N/A
Gastrointestinal tract
N/A
Oral mucosa
N/A
N/A
Esophagus
N/A
Stomach
N/A
Duodenum
N/A
Colon
N/A
Rectum
N/A
Kidney & urinary bladder
N/A
Kidney
N/A
Male tissues
N/A
Testis
N/A
Prostate
N/A
Female tissues
N/A
Breast
N/A
Vagina
N/A
N/A
Ovary
N/A
Placenta
N/A
Adipose & soft tissue
N/A
Soft tissue
N/A
N/A
Skin
N/A
Skin
N/A
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW
RNA-based expert annotation could not be performed, due to inconclusive results. View immunohistochemistry primary data.

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (cerebral cortex)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (cerebellum)
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (caudate, cerebellum)

GENE INFORMATION

Gene name

 TRIM46 (HGNC Symbol)

Synonyms

 FLJ23229, TRIFIC

Description

 Tripartite motif containing 46 (HGNC Symbol)

Entrez gene summary

Chromosome

 1

Cytoband

 q22

Chromosome location (bp)

 155173787 - 155184971

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000163462 (version 83.38)

Entrez gene

 80128

UniProt

 Q7Z4K8 (UniProt - Evidence at transcript level)

neXtProt

 NX_Q7Z4K8

Antibodypedia

 TRIM46 antibodies

PROTEIN BROWSER
TRIM46-001
TRIM46-002
TRIM46-003
TRIM46-004
TRIM46-201
TRIM46-202
TRIM46-203
TRIM46-204

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
TRIM46-001
ENSP00000334657
ENST00000334634
Q7Z4K8 [Direct mapping]
Tripartite motif-containing protein 46
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005622 [intracellular]
GO:0008270 [zinc ion binding]
GO:0046872 [metal ion binding]
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 759 aa
83.4 kDa 		No 0
TRIM46-002
ENSP00000357366
ENST00000368382
Q7Z4K8 [Direct mapping]
Tripartite motif-containing protein 46
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005622 [intracellular]
GO:0008270 [zinc ion binding]
GO:0046872 [metal ion binding]
Show all
 736 aa
80.9 kDa 		No 0
TRIM46-003
ENSP00000357369
ENST00000368385
Q7Z4K8 [Direct mapping]
Tripartite motif-containing protein 46
Show all
Predicted intracellular proteins
Show all
GO:0005515 [protein binding]
GO:0005622 [intracellular]
GO:0008270 [zinc ion binding]
GO:0046872 [metal ion binding]
Show all
 551 aa
61.8 kDa 		No 0
TRIM46-004
ENSP00000357367
ENST00000368383
Q5VT61 [Direct mapping]
Tripartite motif-containing 46, isoform CRA_c; Tripartite motif-containing protein 46
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Predicted intracellular proteins
Show all
GO:0005515 [protein binding]
GO:0005622 [intracellular]
GO:0008270 [zinc ion binding]
GO:0046872 [metal ion binding]
Show all
 644 aa
71.8 kDa 		No 0
TRIM46-201
ENSP00000376245
ENST00000392451
A0A0A0MS35 [Direct mapping]
Tripartite motif-containing protein 46
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005622 [intracellular]
GO:0008270 [zinc ion binding]
GO:0046872 [metal ion binding]
Show all
 717 aa
78.8 kDa 		No 0
TRIM46-202
ENSP00000442719
ENST00000543729
Q7Z4K8 [Direct mapping]
Tripartite motif-containing protein 46
Show all
Predicted intracellular proteins
Show all
GO:0005515 [protein binding]
GO:0005622 [intracellular]
GO:0008270 [zinc ion binding]
GO:0046872 [metal ion binding]
Show all
 498 aa
54.8 kDa 		No 0
TRIM46-203
ENSP00000440254
ENST00000545012
F5GYK0 [Direct mapping]
Tripartite motif-containing protein 46
Show all
Predicted intracellular proteins
Show all
GO:0005515 [protein binding]
GO:0005622 [intracellular]
GO:0008270 [zinc ion binding]
Show all
 633 aa
69.6 kDa 		No 0
TRIM46-204
ENSP00000478669
ENST00000611379
A0A087WUH1 [Direct mapping]
Tripartite motif-containing protein 46
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005622 [intracellular]
GO:0008270 [zinc ion binding]
GO:0046872 [metal ion binding]
Show all
 746 aa
81.8 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.