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IFI16

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:32.7TPM
GTEx:21.5RPKM
FANTOM5:99.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Not detected
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA002134

  

Antibody CAB016293

  

Endothelial cells

 Medium   Not detected  

Glandular cells

 Not detected   Not detected  

Peripheral nerve/ganglion

 Not detected  
   
   

COLON - HPA RNA-seq

Average TPM

32.7
overview Male, age 54 Sample 1
TPM: 33.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 30.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 16.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 28.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 42.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 33.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 36.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 31.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 42
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 33
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 38.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 35
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 24.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

21.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 24.7
Samples: 149

Max RPKM: 83.2
Min RPKM: 7.8
Std RPKM: 12.1
Median RPKM: 21.1
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 83.2
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 74.3
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 60.1
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 53.2
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 52.3
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 51.1
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 50.7
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 48.8
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 48.2
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 46.6
Show all
Colon - Transverse
RPKM: 19.1
Samples: 196

Max RPKM: 60.9
Min RPKM: 2.8
Std RPKM: 10.7
Median RPKM: 15.8
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 60.9
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 56.1
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 52.5
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 47.1
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 46.6
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 45.7
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 44.8
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 44.2
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 42.1
GTEX-ZY6K-1226-SM-5GZYL 50-59 years, male 42.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

99.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 99.0
FF:10014-101C5 62,83,84 years, mixed 99.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.