Tissue expression of PTX3 - Staining in breast

BREAST - Expression summary

Protein expression

RNA expression

HPA:	3.0	TPM
GTEx:	51.6	RPKM
FANTOM5:	65.0	Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Glandular cells:	Low
Myoepithelial cells:	Not detected

Antibody staining	Antibody HPA069320
Adipocytes	Not detected
Glandular cells	Low
Myoepithelial cells	Not detected

BREAST - HPA RNA-seq

Average TPM	3.0

Female, age 52

Sample 1
TPM: 4.7

Cell types%

Glandular cells: 15
Adipocytes: 5
Other cell types: 80

Female, age 80

Sample 2
TPM: 3.1

Cell types%

Glandular cells: 5
Adipocytes: 15
Other cell types: 80

Female, age 47

Sample 3
TPM: 1.2

Cell types%

Glandular cells: 5
Adipocytes: 5
Other cell types: 90

Female, age 38

Sample 4
TPM: 3.2

Cell types%

Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM	51.6

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 51.6

Samples: 214

Max RPKM: 1048.6
Min RPKM: 0.3
Std RPKM: 116.5
Median RPKM: 15.4

GTEX-ZYW4-0826-SM-5GIDG

60-69 years, male

1048.6

GTEX-11WQK-2426-SM-5GU5C

50-59 years, male

740.4

GTEX-ZLFU-2126-SM-4WWEV

40-49 years, male

670.3

GTEX-11P82-1326-SM-5HL62

20-29 years, male

467.5

GTEX-13CF3-2126-SM-5IFJP

60-69 years, female

353.6

GTEX-RUSQ-2026-SM-4GIAK

50-59 years, male

343.2

GTEX-ZAB4-2526-SM-5HL8M

40-49 years, male

336.5

GTEX-WOFL-0826-SM-3MJG1

60-69 years, male

296.6

GTEX-117YX-1426-SM-5H12H

50-59 years, male

290.7

GTEX-X4XY-0926-SM-4E3JD

60-69 years, male

256.7

Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million	65.0

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 65.0

FF:10080-102A8

77 years, female

65.0