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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

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Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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PATHOLOGY ATLAS MELANOMA

GENE/PROTEIN

Antibody validation

Dictionary

Melanoma

MELANOMA - Survival analysis

Best separation

Median separation

Expression cutoff

155.9 FPKM 157.1 FPKM

3-year survival high

50% 50%

3-year survival low

39% 38%

Log-rank P value

1.98e-1 2.97e-1

Interactive survival scatter plot (individual patient data)




Stage:



TCGA RNA samples

Average FPKM

172.1

Number of samples

102

Samples

Sample

Description

FPKM

TCGA-GN-A263-01A 24 years, male, white, stage:iv 625.7
TCGA-BF-AAOX-01A 83 years, male, white, stage:iic 501.0
TCGA-EB-A44O-01A 69 years, male, white, stage:iib 491.6
TCGA-BF-A9VF-01A 77 years, male, white, stage:iic 414.5
TCGA-BF-AAP4-01A 61 years, male, white, stage:iic 407.6
TCGA-XV-A9W2-01A 81 years, male, white, stage:i 358.3
TCGA-WE-A8K4-01A 85 years, male, white, stage:iib 354.1
TCGA-EB-A3XC-01A 74 years, male, white, stage:iic 338.4
TCGA-EB-A5FP-01A 65 years, female, white, stage:iv 319.6
TCGA-EB-A3Y7-01A 86 years, female, white, stage:iiib 311.1
TCGA-EB-A6QY-01A 71 years, male, white, stage:iic 267.2
TCGA-EB-A6QZ-01A 76 years, female, white, stage:iia 266.9
TCGA-EB-A3XB-01A 63 years, male, white, stage:ii 264.3
TCGA-EB-A97M-01A 66 years, male, white, stage:iic 252.3
TCGA-BF-AAP2-01A 62 years, male, white, stage:iib 251.5
TCGA-XV-AAZW-01A 62 years, female, white, stage:ii 247.0
TCGA-EB-A51B-01A 53 years, male, white, stage:iic 237.6
TCGA-ER-A196-01A 64 years, female, white, stage:iic 229.9
TCGA-BF-A5EO-01A 65 years, male, white, stage:iic 221.5
TCGA-EB-A41A-01A 90 years, male, white, stage:iic 220.9
TCGA-BF-A5EP-01A 75 years, female, white, stage:iiic 220.2
TCGA-BF-AAP7-01A 76 years, female, white, stage:iic 216.4
TCGA-EB-A3XF-01A 57 years, male, white, stage:iic 214.9
TCGA-BF-A5ER-01A 63 years, male, white, stage:iic 212.8
TCGA-EB-A5SE-01A 73 years, male, white, stage:iib 208.1
TCGA-FW-A5DX-01A 71 years, male, white, stage:iiic 206.6
TCGA-EB-A82B-01A 58 years, female, asian, stage:iii 206.4
TCGA-GF-A2C7-01A 48 years, male, white, stage:iic 204.8
TCGA-ER-A42H-01A 77 years, male, white 201.8
TCGA-EB-A6R0-01A 58 years, female, white, stage:iic 196.5
TCGA-EB-A5VU-01A 56 years, male, asian, stage:iiib 193.8
TCGA-EB-A85J-01A 66 years, female, white, stage:iib 192.7
TCGA-IH-A3EA-01A 61 years, male, white, stage:iic 187.8
TCGA-BF-A1Q0-01A 80 years, male, white, stage:iic 186.7
TCGA-EB-A85I-01A 66 years, male, white, stage:iic 186.5
TCGA-BF-A3DL-01A 84 years, female, white, stage:iiib 182.8
TCGA-BF-A1PZ-01A 71 years, female, white, stage:iib 182.4
TCGA-D9-A4Z2-01A 50 years, male, white, stage:iiic 180.6
TCGA-EB-A82C-01A 70 years, female, asian, stage:iic 175.7
TCGA-BF-A1PV-01A 74 years, female, white, stage:iic 173.5
TCGA-FR-A2OS-01A 49 years, female, white, stage:iic 172.6
TCGA-EB-A3Y6-01A 56 years, female, white, stage:iic 172.2
TCGA-BF-AAP6-01A 55 years, male, white, stage:iii 169.4
TCGA-FR-A728-01A 54 years, female, white, stage:iiib 167.0
TCGA-BF-A5EQ-01A 63 years, male, white, stage:iic 166.7
TCGA-EB-A42Y-01A 73 years, female, asian, stage:iic 161.3
TCGA-BF-A5ES-01A 76 years, female, white, stage:iic 160.4
TCGA-ER-A19K-01A 79 years, female, white, stage:iic 159.5
TCGA-D9-A4Z3-01A 73 years, female, white, stage:iiic 159.0
TCGA-EB-A44N-01A 59 years, male, white, stage:iic 158.9
TCGA-YG-AA3N-01A 67 years, male, stage:iic 157.4
TCGA-EB-A431-01A 34 years, male, white, stage:iic 156.9
TCGA-BF-A1PX-01A 56 years, male, white, stage:iiib 156.5
TCGA-EB-A24D-01A 72 years, male, white, stage:iiib 155.2
TCGA-EB-A44P-01A 58 years, female, white, stage:iic 154.1
TCGA-XV-A9W5-01A 51 years, male, white, stage:i/ii nos 153.0
TCGA-D9-A3Z4-01A 54 years, male, white, stage:iiic 150.6
TCGA-BF-AAP1-01A 86 years, male, white, stage:iic 147.4
TCGA-FR-A3R1-01A 69 years, male, white, stage:iic 140.7
TCGA-EB-A1NK-01A 48 years, male, white, stage:iic 138.3
TCGA-DA-A960-01A 73 years, male, white, stage:iib 137.7
TCGA-BF-A3DM-01A 63 years, male, white, stage:iia 132.4
TCGA-EB-A42Z-01A 49 years, male, asian, stage:iiic 132.3
TCGA-FS-A1ZN-01A 43 years, male, white, stage:iiia 131.1
TCGA-EB-A4XL-01A 56 years, female, white, stage:iic 130.4
TCGA-XV-AAZY-01A 76 years, female, white, stage:iiic 129.8
TCGA-GN-A8LN-01A 68 years, male, white, stage:iic 129.4
TCGA-FR-A726-01A 90 years, male, white, stage:iic 123.2
TCGA-BF-A3DJ-01A 36 years, female, white, stage:iiib 120.3
TCGA-GN-A4U5-01A 61 years, female, white, stage:ib 119.8
TCGA-EB-A4IQ-01A 42 years, female, asian, stage:iiib 118.9
TCGA-EB-A4P0-01A 82 years, male, white, stage:iic 116.1
TCGA-BF-A3DN-01A 81 years, female, white, stage:iiic 110.5
TCGA-GF-A769-01A 39 years, male, white, stage:iic 107.0
TCGA-XV-AAZV-01A 56 years, female, white, stage:ii 106.0
TCGA-ER-A2NF-01A 53 years, male, white, stage:iiib 105.2
TCGA-HR-A5NC-01A 90 years, female 103.9
TCGA-D3-A5GT-01A 43 years, male, white, stage:iiic 100.9
TCGA-EB-A5SF-01A 78 years, female, white, stage:iic 94.8
TCGA-EB-A5UM-01A 48 years, female, white, stage:iic 93.7
TCGA-EB-A24C-01A 56 years, male, white 92.3
TCGA-EB-A41B-01A 76 years, female, white, stage:iic 87.4
TCGA-EB-A3XE-01A 77 years, female, white, stage:iia 87.4
TCGA-EB-A4OY-01A 65 years, female, white, stage:iiib 87.3
TCGA-EB-A3XD-01A 53 years, female, white, stage:iic 86.0
TCGA-BF-AAOU-01A 73 years, female, white, stage:iic 85.8
TCGA-EB-A553-01A 62 years, male, white, stage:iic 83.4
TCGA-EB-A4IS-01A 77 years, male, white, stage:iib 79.4
TCGA-EB-A551-01A 78 years, female, white, stage:iiic 76.6
TCGA-BF-A1PU-01A 46 years, female, white, stage:iic 75.4
TCGA-EB-A550-01A 75 years, female, white, stage:iic 67.7
TCGA-BF-AAP8-01A 58 years, male, white, stage:iic 67.6
TCGA-ER-A19T-01A 51 years, male, white, stage:iv 65.4
TCGA-ER-A2NB-01A 57 years, male, white, stage:iiib 63.3
TCGA-EB-A57M-01A 56 years, male, asian, stage:iiib 62.7
TCGA-ER-A194-01A 77 years, male, white 60.9
TCGA-GN-A26C-01A 77 years, male, white, stage:iiic 60.2
TCGA-EB-A299-01A 63 years, male, white, stage:iia 58.4
TCGA-EB-A3HV-01A 37 years, male, white, stage:iic 54.6
TCGA-EB-A4OZ-01A 42 years, female, white, stage:iiic 52.5
TCGA-XV-A9VZ-01A 90 years, female, white, stage:ii 50.0
TCGA-D9-A4Z5-01A 68 years, male, white, stage:iib 44.3
Show all

MELANOMA - Protein expression

 

Antibody HPA057236

Antibody CAB022549

 Antibody staining
  High
  Medium
  Low
  Not detected
   
 Intensity
  Strong
  Moderate
  Weak
  Negative
   
 Quantity
  >75%
  75%-25%
  <25%
  Rare
  Negative
   
 Location
  Cytoplasmic/membranous,nuclear
  Cytoplasmic/membranous
  Nuclear
  None
   

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