Tissue expression of HMGB2 - Staining in breast

BREAST - Expression summary

Protein expression

RNA expression

HPA:	96.2	TPM
GTEx:	39.9	RPKM
FANTOM5:	65.0	Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Glandular cells:	Low
Myoepithelial cells:	Low

Antibody staining	Antibody HPA003506	Antibody HPA053314	Antibody CAB037206
Adipocytes	Medium	Not detected
Glandular cells	High	Low	High
Myoepithelial cells	High	Low	High

BREAST - HPA RNA-seq

Average TPM	96.2

Female, age 52

Sample 1
TPM: 96.1

Cell types%

Glandular cells: 15
Adipocytes: 5
Other cell types: 80

Female, age 80

Sample 2
TPM: 89.3

Cell types%

Glandular cells: 5
Adipocytes: 15
Other cell types: 80

Female, age 47

Sample 3
TPM: 87.4

Cell types%

Glandular cells: 5
Adipocytes: 5
Other cell types: 90

Female, age 38

Sample 4
TPM: 112

Cell types%

Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM	39.9

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 39.9

Samples: 214

Max RPKM: 90.2
Min RPKM: 8.0
Std RPKM: 14.4
Median RPKM: 37.8

GTEX-T2YK-2226-SM-32QPT

50-59 years, male

90.2

GTEX-12ZZX-1126-SM-5EGKB

40-49 years, female

85.0

GTEX-ZWKS-2826-SM-5NQ74

30-39 years, male

84.1

GTEX-XMD2-0926-SM-4WWEF

60-69 years, female

80.9

GTEX-Y114-2026-SM-4TT7L

50-59 years, female

78.9

GTEX-11EM3-1326-SM-5N9C6

20-29 years, female

75.8

GTEX-R3RS-0626-SM-48FE1

40-49 years, female

71.7

GTEX-13PL6-2926-SM-5L3I2

40-49 years, female

71.5

GTEX-ZYW4-0826-SM-5GIDG

60-69 years, male

69.4

GTEX-Y8LW-1626-SM-5IFHX

50-59 years, female

68.3

Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million	65.0

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 65.0

FF:10080-102A8

77 years, female

65.0