Tissue expression of HMGB2 - Staining in stomach

STOMACH - Expression summary

Protein expression

RNA expression

HPA:	63.2	TPM
GTEx:	22.1	RPKM

STOMACH 1 - Annotated protein expression

Annotated protein
expression

Glandular cells:

Not detected

Antibody staining	Antibody HPA003506	Antibody HPA053314	Antibody CAB037206
Glandular cells	High	Not detected	High

STOMACH 2 - Annotated protein expression

Annotated protein
expression

Glandular cells:

Medium

Antibody staining	Antibody HPA003506	Antibody HPA053314	Antibody CAB037206
Glandular cells	High	Medium	Medium

STOMACH - HPA RNA-seq

Average TPM	63.2

Female, age 33

Sample 1
TPM: 45.4

Cell types%

Glandular cells: 60
Smooth muscle cells: 5
Other cell types: 35

Male, age 82

Sample 2
TPM: 99.5

Cell types%

Glandular cells: 65
Smooth muscle cells: 5
Other cell types: 30

Male, age 71

Sample 3
TPM: 57

Cell types%

Glandular cells: 50
Smooth muscle cells: 5
Other cell types: 45

Female, age 66

Sample 4
TPM: 50.9

Cell types%

Glandular cells: 50
Smooth muscle cells: 10
Other cell types: 40

STOMACH - GTEx RNA-seq

Average RPKM	22.1

GTEx sample id

Sample description

RPKM

Stomach
RPKM: 22.1

Samples: 193

Max RPKM: 67.3
Min RPKM: 4.6
Std RPKM: 12.3
Median RPKM: 20.0

GTEX-Y3IK-1426-SM-4YCES

50-59 years, female

67.3

GTEX-QCQG-0526-SM-48U2A

50-59 years, female

59.6

GTEX-ZYVF-2726-SM-5GID4

50-59 years, female

56.1

GTEX-POMQ-0826-SM-3P61H

20-29 years, female

55.5

GTEX-WHPG-0426-SM-4M1XW

50-59 years, male

54.3

GTEX-13PVQ-2126-SM-5L3FW

50-59 years, male

53.4

GTEX-117YX-1026-SM-5H11V

50-59 years, male

51.9

GTEX-12C56-0526-SM-5FQST

20-29 years, male

51.4

GTEX-133LE-1326-SM-5IFGO

20-29 years, female

50.4

GTEX-P4PQ-1526-SM-3NMCK

60-69 years, male

50.3

Show all

STOMACH - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue