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SYTL3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:2.6TPM
GTEx:2.8RPKM
FANTOM5:8.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not available
 
 

Antibody staining

Antibody HPA030584

  

Antibody HPA030585

  

Antibody HPA030586

  

Endothelial cells

 Low   Medium   Not detected  

Glandular cells

 Low   Medium   Medium  

Peripheral nerve/ganglion

 Not detected   Medium  
        
     
     
     

COLON - HPA RNA-seq

Average TPM

2.6
overview Male, age 54 Sample 1
TPM: 1.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 3.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 2.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 3.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 2.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 3.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

2.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 2.3
Samples: 149

Max RPKM: 16.8
Min RPKM: 0.7
Std RPKM: 1.5
Median RPKM: 2.1
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 16.8
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 7.8
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 6.8
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 5.4
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 5.3
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 3.9
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 3.8
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 3.7
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 3.7
GTEX-13QBU-2026-SM-5KLZB 40-49 years, female 3.6
Show all
Colon - Transverse
RPKM: 3.2
Samples: 196

Max RPKM: 36.4
Min RPKM: 0.7
Std RPKM: 3.8
Median RPKM: 2.5
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 36.4
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 32.3
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 25.4
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 10.9
GTEX-XBED-1526-SM-4AT5W 60-69 years, male 6.9
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 6.7
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 6.5
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 6.4
GTEX-PWCY-1026-SM-48TD4 20-29 years, female 6.4
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 6.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

8.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 8.1
FF:10014-101C5 62,83,84 years, mixed 8.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.