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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:713.8TPM
GTEx:142.2RPKM
FANTOM5:1997.1Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Medium
Peripheral nerve:Medium
 
 

Antibody staining

Antibody HPA018156

  

Antibody CAB000457

  

Adipocytes

 Low   Not detected  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Medium  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Medium
 
 

Antibody staining

Antibody HPA018156

  

Antibody CAB000457

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Medium   Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

713.8
N/A Female, age 80 Sample 1
TPM: 314.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 296.7
N/A Female, age 57 Sample 3
TPM: 280.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 1123.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 1553.6
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

142.2

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 143.8
Samples: 350

Max RPKM: 1217.8
Min RPKM: 31.6
Std RPKM: 115.5
Median RPKM: 112.3
GTEX-13NYS-0226-SM-5MR49 60-69 years, male 1217.8
GTEX-111VG-2326-SM-5N9BK 60-69 years, male 814.8
GTEX-13JVG-0226-SM-5J1MW 60-69 years, male 749.1
GTEX-S4Q7-1626-SM-3K2AE 20-29 years, male 573.2
GTEX-QDT8-0226-SM-32PL4 30-39 years, female 567.3
GTEX-132AR-0226-SM-5IJBE 50-59 years, female 533.5
GTEX-Q734-1826-SM-2I3EL 40-49 years, female 528.1
GTEX-POMQ-2326-SM-5S2VS 20-29 years, female 522.8
GTEX-13YAN-0426-SM-5O9DR 60-69 years, male 518.9
GTEX-11GSO-2326-SM-5A5LX 60-69 years, male 492.0
Show all
Adipose - Visceral (Omentum)
RPKM: 139.7
Samples: 227

Max RPKM: 784.6
Min RPKM: 27.5
Std RPKM: 106.1
Median RPKM: 113.5
GTEX-ZZPU-0326-SM-5N9BJ 50-59 years, female 784.6
GTEX-UPK5-1826-SM-3GAEB 40-49 years, male 629.3
GTEX-13FHO-2026-SM-5J1OA 60-69 years, male 602.9
GTEX-117YX-0726-SM-5GIET 50-59 years, male 574.6
GTEX-132AR-0526-SM-5J2MJ 50-59 years, female 536.5
GTEX-13X6H-1726-SM-5Q5EH 50-59 years, female 494.4
GTEX-13X6I-1526-SM-5SIAC 60-69 years, male 405.3
GTEX-13N11-1826-SM-5IJDS 50-59 years, female 404.5
GTEX-1128S-0926-SM-5GZZU 60-69 years, female 397.2
GTEX-146FH-2026-SM-5SI9I 50-59 years, female 351.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

1997.1

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 1997.1
FF:10010-101C1 65,65,76 years, mixed 1997.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.