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GKAP1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:3.7TPM
GTEx:3.5RPKM
FANTOM5:11.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA035117

  

Antibody HPA035118

  

Endothelial cells

 Medium   Low  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Medium   Low  
   
   
   

COLON - HPA RNA-seq

Average TPM

3.7
overview Male, age 54 Sample 1
TPM: 4.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 4.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 2.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 5.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 2.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 2.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 4.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 3.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 3.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 5.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

3.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 4.7
Samples: 149

Max RPKM: 11.7
Min RPKM: 1.3
Std RPKM: 1.5
Median RPKM: 4.5
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 11.7
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 10.4
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 8.6
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 8.1
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 7.8
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 7.7
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 7.5
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 7.2
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 7.2
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 7.1
Show all
Colon - Transverse
RPKM: 2.6
Samples: 196

Max RPKM: 6.8
Min RPKM: 0.5
Std RPKM: 1.4
Median RPKM: 2.2
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 6.8
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 6.6
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 6.4
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 6.2
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 5.9
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 5.9
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 5.6
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 5.6
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 5.5
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 5.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

11.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 11.8
FF:10014-101C5 62,83,84 years, mixed 11.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.