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PRPF18

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:16.0TPM
GTEx:6.3RPKM
FANTOM5:37.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
Chondrocytes:Medium
 

Antibody staining

Antibody HPA037599

  

Antibody HPA047950

  

Adipocytes

 Medium   Not detected  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Medium   Not detected  

Chondrocytes

 Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
 
 

Antibody staining

Antibody HPA037599

  

Antibody HPA047950

  

Adipocytes

 Medium   Not detected  

Fibroblasts

 Medium   Low  

Peripheral nerve

 Medium   Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

16.0
N/A Female, age 80 Sample 1
TPM: 14.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 14.9
N/A Female, age 57 Sample 3
TPM: 12.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 23.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 14.8
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

6.3

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 6.6
Samples: 350

Max RPKM: 10.4
Min RPKM: 3.7
Std RPKM: 1.1
Median RPKM: 6.5
GTEX-Y8E4-0726-SM-4WWFN 40-49 years, male 10.4
GTEX-13OVL-0326-SM-5IJCS 50-59 years, male 10.2
GTEX-13O61-2426-SM-5J1NV 60-69 years, male 10.0
GTEX-Y3IK-2526-SM-4WWDM 50-59 years, female 10.0
GTEX-RVPU-2326-SM-2TF6R 50-59 years, male 9.6
GTEX-Y5V6-2526-SM-5IFJV 60-69 years, male 9.4
GTEX-11WQC-2426-SM-5EQKQ 60-69 years, male 9.2
GTEX-147GR-0426-SM-5S2OL 60-69 years, male 9.2
GTEX-1399U-2426-SM-5K7XB 50-59 years, female 9.1
GTEX-1211K-2226-SM-5FQU6 60-69 years, female 8.9
Show all
Adipose - Visceral (Omentum)
RPKM: 6.0
Samples: 227

Max RPKM: 9.4
Min RPKM: 3.2
Std RPKM: 1.1
Median RPKM: 5.9
GTEX-12WSI-1526-SM-5GCNM 50-59 years, male 9.4
GTEX-ZE7O-1526-SM-5J1NH 50-59 years, female 9.2
GTEX-13W46-1226-SM-5SIAS 50-59 years, male 8.8
GTEX-13JUV-0626-SM-5J1MQ 40-49 years, female 8.7
GTEX-13OVL-0826-SM-5L3GV 50-59 years, male 8.4
GTEX-11DYG-2026-SM-5EGGX 60-69 years, male 8.3
GTEX-WFJO-1026-SM-3GIKL 30-39 years, male 8.3
GTEX-11PRG-1526-SM-5HL6Z 50-59 years, male 8.2
GTEX-1313W-1626-SM-5J1OE 50-59 years, female 8.1
GTEX-Y5V5-0226-SM-5S2N8 60-69 years, female 8.1
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

37.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 37.2
FF:10010-101C1 65,65,76 years, mixed 37.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.