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COPS2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:39.3TPM
GTEx:15.2RPKM
FANTOM5:85.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA016867

  

Antibody HPA018271

  

Endothelial cells

 Not detected   Medium  

Glandular cells

 Low   Medium  

Peripheral nerve/ganglion

 Low   Medium  
   
   

COLON - HPA RNA-seq

Average TPM

39.3
overview Male, age 54 Sample 1
TPM: 39.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 41.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 37.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 34.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 41.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 42.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 38.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 31.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 38.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 44.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 43.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 49.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 29
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

15.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 18.4
Samples: 149

Max RPKM: 32.8
Min RPKM: 8.9
Std RPKM: 4.0
Median RPKM: 17.3
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 32.8
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 32.2
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 28.5
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 28.2
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 27.6
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 27.0
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 26.2
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 25.9
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 25.4
GTEX-13FH7-1626-SM-5J2O9 50-59 years, female 24.9
Show all
Colon - Transverse
RPKM: 12.7
Samples: 196

Max RPKM: 37.4
Min RPKM: 5.1
Std RPKM: 5.7
Median RPKM: 11.0
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 37.4
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 30.9
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 29.4
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 27.8
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 27.2
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 26.2
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 26.0
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 25.5
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 24.8
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 24.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

85.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 85.5
FF:10014-101C5 62,83,84 years, mixed 85.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.