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Gene name

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Subclass

Chromosome

External id

In atlas

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Reliability

Reliability

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Validation

Method

Validation

Method

Validation

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Searches

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Expression

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Cell line

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Cancer

Specificity

Tissue

Detectable

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Detectable

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IDH3A
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    TISSUE

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    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

IDH3A

Gene description

Isocitrate dehydrogenase 3 (NAD+) alpha

Protein class

Citric acid cycle related proteins
Enzymes
Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

10
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Expressed in all
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic expression with a granular pattern in most tissues.

DATA RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Pending external verification.

Reliability score

Supported based on 1 antibody.
HPA041465
SHOW MORE

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

IDH3A

Synonyms

Description

Isocitrate dehydrogenase 3 (NAD+) alpha (HGNC Symbol)

Entrez gene summary

Isocitrate dehydrogenases catalyze the oxidative decarboxylation of isocitrate to 2-oxoglutarate. These enzymes belong to two distinct subclasses, one of which utilizes NAD(+) as the electron acceptor and the other NADP(+). Five isocitrate dehydrogenases have been reported: three NAD(+)-dependent isocitrate dehydrogenases, which localize to the mitochondrial matrix, and two NADP(+)-dependent isocitrate dehydrogenases, one of which is mitochondrial and the other predominantly cytosolic. NAD(+)-dependent isocitrate dehydrogenases catalyze the allosterically regulated rate-limiting step of the tricarboxylic acid cycle. Each isozyme is a heterotetramer that is composed of two alpha subunits, one beta subunit, and one gamma subunit. The protein encoded by this gene is the alpha subunit of one isozyme of NAD(+)-dependent isocitrate dehydrogenase. [provided by RefSeq, Jul 2008]

Chromosome

15

Cytoband

q25.1

Chromosome location (bp)

78131498 - 78171949

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000166411 (version 83.38)

Entrez gene

3419

UniProt

P50213 (UniProt - Evidence at protein level)

neXtProt

NX_P50213

Antibodypedia

IDH3A antibodies

PROTEIN BROWSER

IDH3A-001
IDH3A-006
IDH3A-012
IDH3A-014
IDH3A-015
IDH3A-016
IDH3A-017
IDH3A-018
IDH3A-022
IDH3A-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

IDH3A-001
ENSP00000299518
ENST00000299518
P50213 [Direct mapping]
Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
Predicted intracellular proteins
Plasma proteins
Citric acid cycle related proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000287 [magnesium ion binding]
GO:0004449 [isocitrate dehydrogenase (NAD+) activity]
GO:0005634 [nucleus]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0005975 [carbohydrate metabolic process]
GO:0006099 [tricarboxylic acid cycle]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0043209 [myelin sheath]
GO:0044237 [cellular metabolic process]
GO:0044281 [small molecule metabolic process]
GO:0051287 [NAD binding]
GO:0055114 [oxidation-reduction process]
Show all
366 aa
39.6 kDa
No 0
IDH3A-006
ENSP00000453084
ENST00000558554
H0YL72 [Direct mapping]
Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
Show all
Predicted intracellular proteins
Citric acid cycle related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000287 [magnesium ion binding]
GO:0005739 [mitochondrion]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0051287 [NAD binding]
GO:0055114 [oxidation-reduction process]
Show all
331 aa
35.8 kDa
No 0
IDH3A-012
ENSP00000452754
ENST00000559186
H0YKD0 [Direct mapping]
Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
Show all
Predicted intracellular proteins
Citric acid cycle related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000287 [magnesium ion binding]
GO:0005739 [mitochondrion]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0051287 [NAD binding]
GO:0055114 [oxidation-reduction process]
Show all
109 aa
12.1 kDa
No 0
IDH3A-014
ENSP00000453222
ENST00000559881
H0YLI6 [Direct mapping]
Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
Show all
Predicted intracellular proteins
Citric acid cycle related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000287 [magnesium ion binding]
GO:0005739 [mitochondrion]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0051287 [NAD binding]
GO:0055114 [oxidation-reduction process]
Show all
134 aa
14.8 kDa
No 0
IDH3A-015
ENSP00000453903
ENST00000560770
A0A0G2JL95 [Direct mapping]
Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
Show all
Predicted intracellular proteins
Citric acid cycle related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
8 aa
0.9 kDa
No 0
IDH3A-016
ENSP00000453480
ENST00000557826
H0YM64 [Direct mapping]
Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
Show all
Predicted intracellular proteins
Citric acid cycle related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000287 [magnesium ion binding]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0051287 [NAD binding]
GO:0055114 [oxidation-reduction process]
Show all
46 aa
5.2 kDa
No 0
IDH3A-017
ENSP00000453989
ENST00000559205
H0YNF5 [Direct mapping]
Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
Show all
Predicted intracellular proteins
Citric acid cycle related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000287 [magnesium ion binding]
GO:0005739 [mitochondrion]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0051287 [NAD binding]
GO:0055114 [oxidation-reduction process]
Show all
87 aa
9.3 kDa
No 0
IDH3A-018
ENSP00000453795
ENST00000561366
H0YMY5 [Direct mapping]
Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
Show all
Predicted intracellular proteins
Citric acid cycle related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0055114 [oxidation-reduction process]
Show all
45 aa
5.2 kDa
No 0
IDH3A-022
ENSP00000453747
ENST00000561279
H0YMU3 [Direct mapping]
Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
Show all
Predicted intracellular proteins
Citric acid cycle related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000287 [magnesium ion binding]
GO:0005739 [mitochondrion]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0051287 [NAD binding]
GO:0055114 [oxidation-reduction process]
Show all
175 aa
19.2 kDa
No 0
IDH3A-201
ENSP00000485769
ENST00000629769
Q68D72 [Direct mapping]
Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Putative uncharacterized protein DKFZp686A08194
Show all
Predicted intracellular proteins
Citric acid cycle related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
37 aa
4 kDa
No 0

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