Tissue expression of CDYL2 - Summary - The Human Protein Atlas

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CDYL2

TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	CDYL2
Gene description	Chromodomain protein, Y-like 2
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	4
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Mixed
GTEx:	Tissue enhanced (cerebellum)
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

General nuclear expression.

DATA RELIABILITY
Data reliability description	Antibody staining mainly consistent with RNA expression data.
Reliability score	Approved based on 1 antibody. HPA041016
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Mixed
GTEx dataset Organ Expression Alphabetical RNA tissue category: Tissue enhanced (cerebellum)
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	CDYL2 (HGNC Symbol)
Synonyms	FLJ38866
Description	Chromodomain protein, Y-like 2 (HGNC Symbol)
Entrez gene summary
Chromosome	16
Cytoband	q23.2
Chromosome location (bp)	80597906 - 80804329
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000166446 (version 83.38)
Entrez gene	124359
UniProt	Q8N8U2 (UniProt - Evidence at protein level)
neXtProt	NX_Q8N8U2
Antibodypedia	CDYL2 antibodies

PROTEIN BROWSER

CDYL2-001	CDYL2-002	CDYL2-003	CDYL2-004

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
CDYL2-001 ENSP00000476295 ENST00000570137	Q8N8U2 [Direct mapping] Chromodomain Y-like protein 2 Show all	Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003824 [catalytic activity] GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0008152 [metabolic process] GO:0035064 [methylated histone binding] Show all	506 aa 56.5 kDa	No	0
CDYL2-002 ENSP00000455111 ENST00000563890	A0A0B4J291 [Direct mapping] Chromodomain Y-like protein 2 Show all	Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003824 [catalytic activity] GO:0005634 [nucleus] GO:0008152 [metabolic process] Show all	507 aa 56.6 kDa	No	0
CDYL2-003 ENSP00000456934 ENST00000566173	A0A0B4J291 [Direct mapping] Chromodomain Y-like protein 2 Show all	Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003824 [catalytic activity] GO:0005634 [nucleus] GO:0008152 [metabolic process] Show all	507 aa 56.6 kDa	No	0
CDYL2-004 ENSP00000454546 ENST00000562812	A0A0B4J291 [Direct mapping] Chromodomain Y-like protein 2 Show all	Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003824 [catalytic activity] GO:0005634 [nucleus] GO:0008152 [metabolic process] Show all	507 aa 56.6 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.