Expression of FAM96A in cancer - Summary - The Human Protein Atlas

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FAM96A

TISSUE

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CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	FAM96A
Gene description	Family with sequence similarity 96, member A
Protein class	Predicted secreted proteins
Predicted localization	Secreted
Number of transcripts	4
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Expressed in all
HPA (cell line):	Expressed in all
HPA (normal tissue):	Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in most tissues.

ANTIBODY IHC RELIABILITY
Data reliability description	Pending external verification.
Reliability score	Approved based on 1 antibody. HPA040459
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA040459

GENE INFORMATION
Gene name	FAM96A (HGNC Symbol)
Synonyms	FLJ22875
Description	Family with sequence similarity 96, member A (HGNC Symbol)
Entrez gene summary
Chromosome	15
Cytoband	q22.31
Chromosome location (bp)	64072559 - 64094018
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000166797 (version 83.38)
Entrez gene	84191
UniProt	Q9H5X1 (UniProt - Evidence at protein level)
neXtProt	NX_Q9H5X1
Antibodypedia	FAM96A antibodies

PROTEIN BROWSER

FAM96A-001	FAM96A-002	FAM96A-004	FAM96A-006

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
FAM96A-001 ENSP00000300030 ENST00000300030	Q9H5X1 [Direct mapping] MIP18 family protein FAM96A Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003674 [molecular_function] GO:0005515 [protein binding] GO:0005575 [cellular_component] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0007059 [chromosome segregation] GO:0008150 [biological_process] GO:0016226 [iron-sulfur cluster assembly] GO:0046872 [metal ion binding] Show all	160 aa 18.4 kDa	Yes	0
FAM96A-002 ENSP00000369644 ENST00000380290	Q9H5X1 [Direct mapping] MIP18 family protein FAM96A Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003674 [molecular_function] GO:0005515 [protein binding] GO:0005575 [cellular_component] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0007059 [chromosome segregation] GO:0008150 [biological_process] GO:0016226 [iron-sulfur cluster assembly] GO:0046872 [metal ion binding] Show all	102 aa 11.6 kDa	Yes	0
FAM96A-004 ENSP00000454079 ENST00000557835	Q9H5X1 [Direct mapping] MIP18 family protein FAM96A Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003674 [molecular_function] GO:0005515 [protein binding] GO:0005575 [cellular_component] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0007059 [chromosome segregation] GO:0008150 [biological_process] GO:0016226 [iron-sulfur cluster assembly] GO:0046872 [metal ion binding] Show all	102 aa 11.6 kDa	Yes	0
FAM96A-006 ENSP00000452953 ENST00000559950	H0YKV4 [Direct mapping] Family with sequence similarity 96, member A, isoform CRA_a; MIP18 family protein FAM96A Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0007059 [chromosome segregation] GO:0016226 [iron-sulfur cluster assembly] Show all	130 aa 14.9 kDa	Yes	0

Contact

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.