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MRPL16

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:46.5TPM
GTEx:27.4RPKM
FANTOM5:66.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA054133

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

46.5
overview Male, age 54 Sample 1
TPM: 35.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 37
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 41.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 42
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 29.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 57.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 72.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 52.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 42.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 53.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 46.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 52.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 40.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

27.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 24.7
Samples: 149

Max RPKM: 38.1
Min RPKM: 14.0
Std RPKM: 3.6
Median RPKM: 24.8
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 38.1
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 32.3
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 31.9
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 31.8
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 31.3
GTEX-12WSD-2626-SM-5EGJE 60-69 years, female 31.2
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 31.2
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 31.1
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 30.2
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 29.7
Show all
Colon - Transverse
RPKM: 29.5
Samples: 196

Max RPKM: 54.6
Min RPKM: 6.6
Std RPKM: 7.2
Median RPKM: 28.1
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 54.6
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 52.7
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 48.7
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 48.6
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 47.4
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 46.2
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 43.8
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 43.5
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 43.4
GTEX-1128S-1626-SM-5H12O 60-69 years, female 43.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

66.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 66.1
FF:10014-101C5 62,83,84 years, mixed 66.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.