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TUBA1C

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:111.8TPM
GTEx:27.9RPKM
FANTOM5:213.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Chondrocytes:High
Fibroblasts:High
Peripheral nerve:High
 
 
 

Antibody staining

Antibody HPA039247

  

Antibody HPA043684

  

Antibody HPA063394

  

Adipocytes

 Medium   Not detected  

Chondrocytes

 High   Low   Medium  

Fibroblasts

 High   Not detected   Low  

Peripheral nerve

 High   High  
        
        
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:High
Peripheral nerve:High
 
 

Antibody staining

Antibody HPA039247

  

Antibody HPA043684

  

Antibody HPA063394

  

Adipocytes

 Medium   Not detected   Not detected  

Fibroblasts

 High   Not detected   Low  

Peripheral nerve

 High   High   Medium  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

111.8
N/A Female, age 80 Sample 1
TPM: 48.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 37.4
N/A Female, age 57 Sample 3
TPM: 32.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 233.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 207.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

27.9

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 24.8
Samples: 350

Max RPKM: 178.3
Min RPKM: 8.0
Std RPKM: 13.6
Median RPKM: 22.4
GTEX-ZYVF-0226-SM-5GIEG 50-59 years, female 178.3
GTEX-X4XY-0326-SM-46MVZ 60-69 years, male 109.1
GTEX-13O1R-0226-SM-5K7U5 60-69 years, male 76.8
GTEX-T5JW-1726-SM-3GADN 20-29 years, female 62.6
GTEX-132AR-0226-SM-5IJBE 50-59 years, female 57.0
GTEX-POMQ-2326-SM-5S2VS 20-29 years, female 53.8
GTEX-Q2AH-1726-SM-3NB2B 40-49 years, male 53.6
GTEX-PWOO-2226-SM-2S1P1 40-49 years, female 50.2
GTEX-QESD-1526-SM-2S1QT 20-29 years, male 49.2
GTEX-QCQG-1826-SM-2S1P2 50-59 years, female 49.0
Show all
Adipose - Visceral (Omentum)
RPKM: 32.7
Samples: 227

Max RPKM: 146.1
Min RPKM: 5.2
Std RPKM: 25.3
Median RPKM: 26.7
GTEX-13X6H-1726-SM-5Q5EH 50-59 years, female 146.1
GTEX-133LE-0926-SM-5P9J1 20-29 years, female 135.2
GTEX-Y114-1326-SM-4TT9A 50-59 years, female 125.8
GTEX-13QBU-1326-SM-5LU4K 40-49 years, female 122.1
GTEX-11EM3-1126-SM-5A5KM 20-29 years, female 108.9
GTEX-13RTK-0726-SM-5Q5EN 20-29 years, male 99.0
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 97.7
GTEX-ZA64-0926-SM-5HL7H 20-29 years, male 93.5
GTEX-132QS-0826-SM-5K7WV 60-69 years, male 91.8
GTEX-ZYVF-1026-SM-5E44V 50-59 years, female 87.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

213.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 213.5
FF:10010-101C1 65,65,76 years, mixed 213.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.