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TUBA1C

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:158.6TPM
GTEx:35.0RPKM
FANTOM5:265.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA039247

  

Antibody HPA043684

  

Antibody HPA063394

  

Endothelial cells

 High   Low   Medium  

Glandular cells

 High   Medium   Medium  

Peripheral nerve/ganglion

 High   Medium   Medium  
     
     
     

COLON - HPA RNA-seq

Average TPM

158.6
overview Male, age 54 Sample 1
TPM: 121.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 128.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 135.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 144.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 111.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 219.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 246.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 172.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 113
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 240.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 163.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 142.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 123.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

35.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 19.4
Samples: 149

Max RPKM: 101.7
Min RPKM: 6.8
Std RPKM: 11.6
Median RPKM: 16.6
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 101.7
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 52.0
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 48.8
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 48.8
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 47.0
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 44.2
GTEX-XBED-1726-SM-47JYO 60-69 years, male 40.9
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 39.8
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 39.6
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 36.4
Show all
Colon - Transverse
RPKM: 46.9
Samples: 196

Max RPKM: 159.5
Min RPKM: 7.5
Std RPKM: 28.1
Median RPKM: 44.7
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 159.5
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 142.6
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 130.5
GTEX-144GM-1226-SM-5LU52 20-29 years, male 128.5
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 120.2
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 116.5
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 102.6
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 102.0
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 101.2
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 101.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

265.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 265.9
FF:10014-101C5 62,83,84 years, mixed 265.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.