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KRT80
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PATHOLOGY ATLAS

GENE/PROTEIN

Dictionary

GENERAL INFORMATION

Gene name

KRT80

Gene description

Keratin 80, type II

Protein class

Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

2
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Mixed
HPA (cell line):Cell line enhanced (A-431, MCF7, U-2 OS)
HPA (normal tissue):Tissue enhanced (skin)

Protein evidence

Evidence at protein level

ANTIBODY IHC RELIABILITY

Reliability score

Pending cancer tissue analysis.

PROGNOSTIC SUMMARY

Prognostic marker in breast cancer (unfavourable).
Breast cancer p<0.001
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Mixed

PROTEIN EXPRESSION

Pending cancer tissue analysis


STAINING SUMMARY

 

GENE INFORMATION

Gene name

KRT80 (HGNC Symbol)

Synonyms

KB20

Description

Keratin 80, type II (HGNC Symbol)

Entrez gene summary

Keratins are intermediate filament proteins responsible for the structural integrity of epithelial cells and are subdivided into epithelial keratins and hair keratins. This gene's expression profile shows that it encodes a type II epithelial keratin, although structurally the encoded protein is more like a type II hair keratin. This protein is involved in cell differentiation, localizing near desmosomal plaques in earlier stages of differentiation but then dispersing throughout the cytoplasm in terminally differentiating cells. The type II keratins are clustered in a region of chromosome 12q13. Two transcript variants encoding two different fully functional isoforms have been found for this gene.[provided by RefSeq, Oct 2010]

Chromosome

12

Cytoband

q13.13

Chromosome location (bp)

52168996 - 52192000

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000167767 (version 83.38)

Entrez gene

144501

UniProt

Q6KB66 (UniProt - Evidence at protein level)

neXtProt

NX_Q6KB66

Antibodypedia

KRT80 antibodies

PROTEIN BROWSER

KRT80-001
KRT80-002

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

KRT80-001
ENSP00000369361
ENST00000313234
Q6KB66 [Direct mapping]
Keratin, type II cytoskeletal 80
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Predicted intracellular proteins
Plasma proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005198 [structural molecule activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005882 [intermediate filament]
GO:0045095 [keratin filament]
Show all
422 aa
47.2 kDa
No 0
KRT80-002
ENSP00000378292
ENST00000394815
Q6KB66 [Direct mapping]
Keratin, type II cytoskeletal 80
Show all
Predicted intracellular proteins
Plasma proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005198 [structural molecule activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005882 [intermediate filament]
GO:0045095 [keratin filament]
Show all
452 aa
50.5 kDa
No 0

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