We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
OTUB1
  • TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA SPLEEN
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:55.0TPM
GTEx:39.5RPKM
FANTOM5:83.0Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Medium
Cells in white pulp:Medium
 

Antibody staining

Antibody HPA039176

 

Antibody CAB072836

 

Cells in red pulp

Not detected   Medium  

Cells in white pulp

Low   Medium  
   
   
   

SPLEEN - HPA RNA-seq

Average TPM

55.0

overview Female, age 60 Sample 1
TPM: 53
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17 Sample 2
TPM: 57.3
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20 Sample 3
TPM: 54.8
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19 Sample 4
TPM: 58.6
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65 Sample 5
TPM: 51.4
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

39.5

GTEx sample id

Sample description

RPKM

Spleen
RPKM: 39.5
Samples: 104

Max RPKM: 51.4
Min RPKM: 28.8
Std RPKM: 4.6
Median RPKM: 39.4
GTEX-O5YT-0926-SM-48TDG 20-29 years, male 51.4
GTEX-U4B1-0526-SM-4DXTK 40-49 years, male 48.6
GTEX-QLQW-0126-SM-447BK 30-39 years, male 48.5
GTEX-QV31-0126-SM-447BP 30-39 years, male 48.3
GTEX-T5JW-0126-SM-4DM6K 20-29 years, female 48.2
GTEX-U3ZH-0126-SM-4DXUK 30-39 years, male 47.0
GTEX-12WSG-0926-SM-5EGIH 50-59 years, female 46.1
GTEX-X3Y1-0126-SM-4PQZA 40-49 years, male 46.1
GTEX-QMRM-0226-SM-4R1K7 50-59 years, male 45.8
GTEX-12WSJ-0526-SM-5GCOZ 40-49 years, female 45.7
GTEX-XGQ4-0126-SM-4AT4H 50-59 years, male 45.7
GTEX-11NSD-0426-SM-5N9CR 20-29 years, male 45.6
GTEX-XUJ4-0226-SM-4BOP8 60-69 years, female 45.5
GTEX-XQ8I-1726-SM-4BOQB 50-59 years, male 45.4
GTEX-XXEK-0126-SM-4BRVU 50-59 years, male 45.4
GTEX-UPK5-1626-SM-4JBHI 40-49 years, male 44.9
GTEX-YEC4-0126-SM-4W21T 40-49 years, male 44.7
GTEX-146FQ-0626-SM-5LU9U 30-39 years, male 44.5
GTEX-POMQ-0126-SM-48TD6 20-29 years, female 44.4
GTEX-ZDTT-1026-SM-5KM19 60-69 years, male 43.9
GTEX-13N11-0126-SM-5KM2Z 50-59 years, female 43.8
GTEX-XMK1-0126-SM-4B65F 40-49 years, male 43.8
GTEX-ZV6S-0826-SM-5NQ6Z 40-49 years, female 43.7
GTEX-PX3G-0926-SM-48U12 20-29 years, female 43.5
GTEX-13X6H-0726-SM-5Q5BX 50-59 years, female 43.4
GTEX-OIZH-0926-SM-48TBR 50-59 years, male 43.2
GTEX-P4QS-0926-SM-48TBS 60-69 years, male 43.0
GTEX-X4LF-0226-SM-4QAS8 50-59 years, male 43.0
GTEX-146FR-1926-SM-5NQA6 60-69 years, female 42.3
GTEX-WFON-0126-SM-4LVM9 40-49 years, male 42.1
GTEX-Z9EW-0726-SM-5HL9H 40-49 years, male 42.1
GTEX-U3ZN-0126-SM-4DXUM 30-39 years, female 42.0
GTEX-11XUK-0426-SM-5EQML 40-49 years, female 41.9
GTEX-RUSQ-0126-SM-47JWV 50-59 years, male 41.6
GTEX-QCQG-0226-SM-48U28 50-59 years, female 41.5
GTEX-ZVZP-0726-SM-59HKA 50-59 years, male 41.3
GTEX-S3XE-0626-SM-4AD6B 50-59 years, male 41.2
GTEX-OOBJ-0926-SM-48TDO 60-69 years, male 41.0
GTEX-S4Z8-0226-SM-4AD5K 60-69 years, male 40.7
GTEX-YB5K-1926-SM-4VDT4 40-49 years, female 40.5
GTEX-ZVP2-0526-SM-51MSC 50-59 years, male 40.5
GTEX-144GN-2126-SM-5O99D 50-59 years, male 40.4
GTEX-ZPU1-1026-SM-4YCEQ 40-49 years, male 40.4
GTEX-147F3-0126-SM-5NQBJ 50-59 years, female 40.2
GTEX-14DAR-0326-SM-5S2PS 50-59 years, male 40.2
GTEX-XAJ8-0126-SM-47JYG 40-49 years, male 40.1
GTEX-ZLFU-0526-SM-4WWBN 40-49 years, male 40.1
GTEX-13CF3-0226-SM-5J1NW 60-69 years, female 39.8
GTEX-QDVN-0526-SM-48TZ4 50-59 years, male 39.8
GTEX-12WSN-0126-SM-5DUX5 40-49 years, male 39.5
GTEX-13S86-0126-SM-5S2PI 40-49 years, male 39.5
GTEX-R55G-0226-SM-48FEI 40-49 years, female 39.4
GTEX-VJYA-0126-SM-4KL1P 60-69 years, male 39.4
GTEX-11VI4-0126-SM-5GU6Z 40-49 years, female 39.3
GTEX-1399R-0226-SM-5IJGG 30-39 years, male 39.2
GTEX-131XE-1126-SM-5EGHW 50-59 years, male 39.0
GTEX-1399S-0226-SM-5IFFG 30-39 years, female 39.0
GTEX-ZYWO-0226-SM-5GZX3 40-49 years, female 38.7
GTEX-12BJ1-0726-SM-5EGGF 60-69 years, male 38.6
GTEX-W5WG-0626-SM-4SOID 50-59 years, female 38.6
GTEX-XV7Q-0126-SM-4BRVK 40-49 years, female 38.5
GTEX-132QS-0226-SM-5IFFZ 60-69 years, male 38.4
GTEX-Q2AH-0226-SM-48U1I 40-49 years, male 38.2
GTEX-WHWD-0126-SM-4OORS 50-59 years, male 38.2
GTEX-11LCK-0126-SM-5A5M5 30-39 years, male 38.1
GTEX-ZYFG-0726-SM-5GIDX 60-69 years, female 38.1
GTEX-Y5LM-0326-SM-4VBRN 40-49 years, female 37.9
GTEX-YB5E-0426-SM-5IFHR 40-49 years, male 37.8
GTEX-QV44-0126-SM-4R1KH 50-59 years, male 37.7
GTEX-13111-0126-SM-5EGHO 50-59 years, male 37.5
GTEX-ZP4G-0326-SM-4YCEF 20-29 years, female 37.5
GTEX-Y3I4-0126-SM-4TT26 50-59 years, male 37.3
GTEX-11P81-1326-SM-5GU5S 30-39 years, female 37.0
GTEX-X585-1826-SM-4QAS3 50-59 years, male 36.9
GTEX-XPVG-0626-SM-4B65B 50-59 years, male 36.7
GTEX-YFCO-0926-SM-5LUA5 40-49 years, male 36.7
GTEX-1122O-0526-SM-5N9DM 60-69 years, female 36.6
GTEX-145MN-0126-SM-5RQHY 30-39 years, male 36.6
GTEX-ZZPU-0126-SM-5E446 50-59 years, female 36.5
GTEX-117YX-2126-SM-5GIEL 50-59 years, male 36.4
GTEX-13FH7-1326-SM-5IFG8 50-59 years, female 36.3
GTEX-UJHI-0126-SM-4IHLP 50-59 years, female 36.2
GTEX-11DXX-0726-SM-5H12X 60-69 years, female 36.1
GTEX-131XG-0426-SM-5IFGD 50-59 years, female 35.8
GTEX-ZAB5-0526-SM-5CVMU 50-59 years, male 35.1
GTEX-13VXT-1326-SM-5LU3Y 20-29 years, female 34.9
GTEX-P4PP-0926-SM-48TBZ 30-39 years, female 34.6
GTEX-PW2O-0126-SM-48TC8 20-29 years, male 34.6
GTEX-13PVR-0326-SM-5RQJY 60-69 years, female 34.5
GTEX-13U4I-1626-SM-5IFFR 40-49 years, female 34.5
GTEX-14E6E-1226-SM-5S2R5 30-39 years, male 34.4
GTEX-Y3IK-0126-SM-4WWE9 50-59 years, female 34.3
GTEX-12WSK-0126-SM-5GCO7 40-49 years, female 34.1
GTEX-Y8LW-0126-SM-4VBS1 50-59 years, female 33.9
GTEX-PLZ6-0126-SM-48TC6 30-39 years, male 33.2
GTEX-139T6-0226-SM-5IFGZ 50-59 years, male 33.1
GTEX-13PL7-1126-SM-5MR5O 60-69 years, female 31.7
GTEX-139YR-0426-SM-5IFFV 50-59 years, male 31.6
GTEX-ZLWG-0426-SM-4WWFA 50-59 years, female 31.6
GTEX-Q734-0226-SM-48U1A 40-49 years, female 30.7
GTEX-11EQ9-0426-SM-5A5JY 30-39 years, male 30.4
GTEX-1211K-0426-SM-5FQTP 60-69 years, female 30.0
GTEX-Y114-0726-SM-4TT6U 50-59 years, female 29.6
GTEX-11P7K-0426-SM-5BC5H 30-39 years, male 28.8
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

83.0

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 83.0
FF:10025-101D7 39,50,70 years, male 83.0

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.