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RPSA

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:811.3TPM
GTEx:205.5RPKM
FANTOM5:130.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody CAB009561

  

Endothelial cells

 Low  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

811.3
overview Male, age 54 Sample 1
TPM: 653.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 850.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 833.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 405.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 506.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1193
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1289.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1000.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 801.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 990.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 491.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1001.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 528.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

205.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 191.4
Samples: 149

Max RPKM: 355.8
Min RPKM: 106.9
Std RPKM: 42.8
Median RPKM: 184.4
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 355.8
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 329.1
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 319.1
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 307.7
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 299.2
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 291.2
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 283.2
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 282.6
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 278.8
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 264.6
Show all
Colon - Transverse
RPKM: 216.3
Samples: 196

Max RPKM: 420.9
Min RPKM: 131.7
Std RPKM: 53.4
Median RPKM: 207.9
GTEX-1128S-1626-SM-5H12O 60-69 years, female 420.9
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 392.9
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 366.2
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 362.4
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 349.2
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 336.4
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 335.1
GTEX-QCQG-1626-SM-48U26 50-59 years, female 334.7
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 325.0
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 311.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

130.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 130.3
FF:10014-101C5 62,83,84 years, mixed 130.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.