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ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:69.0TPM
GTEx:28.3RPKM
FANTOM5:80.8Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA039291

  

Antibody HPA044062

  

Antibody CAB017448

  

Squamous epithelial cells

 Medium   Medium   Not detected  
     
     

ESOPHAGUS - HPA RNA-seq

Average TPM

69.0
overview Female, age 70 Sample 1
TPM: 65.9
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 76.3
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 64.6
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

28.3

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 28.3
Samples: 286

Max RPKM: 113.3
Min RPKM: 14.5
Std RPKM: 10.1
Median RPKM: 26.0
GTEX-132AR-2226-SM-5J2NT 50-59 years, female 113.3
GTEX-RUSQ-0826-SM-47JWW 50-59 years, male 95.0
GTEX-NPJ8-1926-SM-3MJGB 40-49 years, male 84.9
GTEX-13S86-0826-SM-5SI6J 40-49 years, male 65.1
GTEX-14BMU-0926-SM-5S2QB 20-29 years, female 50.2
GTEX-XQ3S-1126-SM-4BOPK 20-29 years, male 49.7
GTEX-TMMY-1126-SM-4DXSX 40-49 years, female 49.2
GTEX-ZY6K-0626-SM-59HJL 50-59 years, male 48.5
GTEX-RU1J-0326-SM-46MUM 20-29 years, female 46.2
GTEX-XGQ4-1526-SM-4AT6H 50-59 years, male 45.5
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

80.8

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 80.8
FF:10015-101C6 68,74,75 years, mixed 80.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.