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COL3A1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:227.8TPM
GTEx:190.8RPKM
FANTOM5:148.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
Endothelial cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA007583

  

Antibody CAB016766

  

Antibody CAB059993

  

Glandular cells

 Medium   Not detected   Not detected  

Endothelial cells

 Low   High  

Peripheral nerve/ganglion

 Not detected   Not detected  
     
     
     

COLON - HPA RNA-seq

Average TPM

227.8
overview Male, age 54 Sample 1
TPM: 389.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 138.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 97.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 117.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 396.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 397.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 145.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 175.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 317.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 136.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 239.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 256.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 152.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

190.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 230.2
Samples: 149

Max RPKM: 816.1
Min RPKM: 42.8
Std RPKM: 111.9
Median RPKM: 203.3
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 816.1
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 650.0
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 571.3
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 515.9
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 495.1
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 443.1
GTEX-111CU-1226-SM-5EGIN 50-59 years, male 441.9
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 441.7
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 435.5
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 409.6
Show all
Colon - Transverse
RPKM: 160.8
Samples: 196

Max RPKM: 662.0
Min RPKM: 15.9
Std RPKM: 127.6
Median RPKM: 117.7
GTEX-144GN-1126-SM-5LU33 50-59 years, male 662.0
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 659.6
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 654.2
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 620.3
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 615.4
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 538.5
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 528.0
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 508.7
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 466.6
GTEX-QDVJ-1326-SM-48U1X 50-59 years, male 452.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

148.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 148.4
FF:10014-101C5 62,83,84 years, mixed 148.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.