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CA7

COLON - Expression summary

RNA expression
HPA:55.7TPM
GTEx:18.9RPKM
FANTOM5:25.7Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA047237

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

55.7
overview Male, age 54 Sample 1
TPM: 9.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 63.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 39.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 60.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 6.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 26.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 53.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 145.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 54.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 53
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 98.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 49.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 61.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

18.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.8
Samples: 149

Max RPKM: 26.6
Min RPKM: 0.0
Std RPKM: 2.6
Median RPKM: 0.0
GTEX-XBED-1726-SM-47JYO 60-69 years, male 26.6
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 10.9
GTEX-V955-1726-SM-4JBHF 60-69 years, male 10.3
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 7.2
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 6.4
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 4.9
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 4.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 3.7
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 3.6
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 3.1
Show all
Colon - Transverse
RPKM: 32.7
Samples: 196

Max RPKM: 127.6
Min RPKM: 0.0
Std RPKM: 29.8
Median RPKM: 30.8
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 127.6
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 115.2
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 114.6
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 107.9
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 105.6
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 103.8
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 99.6
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 99.3
GTEX-PWN1-1426-SM-48TDF 40-49 years, female 97.4
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 94.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

25.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 25.7
FF:10014-101C5 62,83,84 years, mixed 25.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.