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ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:21.2TPM
GTEx:3.8RPKM
FANTOM5:33.8Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA047213

  

Antibody HPA062123

  

Antibody CAB004506

  

Squamous epithelial cells

 Medium   Medium   Low  
     
     
     

ESOPHAGUS - HPA RNA-seq

Average TPM

21.2
overview Female, age 70 Sample 1
TPM: 17.1
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 17.9
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 28.5
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

3.8

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 3.8
Samples: 286

Max RPKM: 6.4
Min RPKM: 1.0
Std RPKM: 1.1
Median RPKM: 3.9
GTEX-ZT9X-0526-SM-5GCOP 40-49 years, male 6.4
GTEX-13RTK-0526-SM-5S2QF 20-29 years, male 6.2
GTEX-P4QS-0626-SM-3NMD1 60-69 years, male 6.0
GTEX-Y8LW-0726-SM-5IFI1 50-59 years, female 5.9
GTEX-ZDYS-0826-SM-4WWCR 50-59 years, male 5.8
GTEX-1211K-0926-SM-5FQTL 60-69 years, female 5.7
GTEX-145ME-0526-SM-5QGQV 40-49 years, female 5.7
GTEX-145MF-1426-SM-5O9B6 50-59 years, male 5.7
GTEX-XV7Q-1126-SM-4BRVS 40-49 years, female 5.7
GTEX-12C56-1226-SM-5FQSU 20-29 years, male 5.6
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

33.8

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 33.8
FF:10015-101C6 68,74,75 years, mixed 33.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.