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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:64.6TPM
GTEx:272.7RPKM
FANTOM5:191.9Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Glandular cells:High
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA006461

 

Antibody HPA056108

 

Antibody CAB005192

 

Antibody CAB015417

 

Adipocytes

High   Medium   High   High  

Glandular cells

High   Low   High   Medium  

Myoepithelial cells

Not detected   Medium   Not detected   Not detected  
       
       
       

BREAST - HPA RNA-seq

Average TPM

64.6

overview Female, age 52 Sample 1
TPM: 51.4
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 33.4
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 148.7
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 24.9
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

272.7

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 272.7
Samples: 214

Max RPKM: 2176.5
Min RPKM: 4.7
Std RPKM: 354.0
Median RPKM: 133.5
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 2176.5
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 1859.4
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 1484.3
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 1448.9
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 1422.6
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 1301.1
GTEX-117YX-1426-SM-5H12H 50-59 years, male 1281.0
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 1259.6
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 1242.1
GTEX-144GM-0926-SM-5O994 20-29 years, male 1117.1
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 982.8
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 976.4
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 965.4
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 942.2
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 900.7
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 867.1
GTEX-11P82-1326-SM-5HL62 20-29 years, male 819.9
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 816.0
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 813.6
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 809.9
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 808.2
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 744.7
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 740.8
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 718.9
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 654.1
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 653.4
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 650.8
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 647.0
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 625.0
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 609.3
GTEX-REY6-2426-SM-48FF5 60-69 years, male 583.2
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 580.2
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 562.0
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 559.3
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 556.0
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 513.4
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 492.1
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 479.7
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 476.4
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 474.2
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 457.3
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 456.2
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 430.2
GTEX-WFON-1826-SM-3GILG 40-49 years, male 429.9
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 419.9
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 419.5
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 401.3
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 389.0
GTEX-R55D-0826-SM-48FEA 50-59 years, male 370.8
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 353.7
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 350.0
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 324.5
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 320.0
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 318.0
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 314.7
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 301.7
GTEX-XBED-1626-SM-47JYN 60-69 years, male 300.9
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 283.9
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 280.6
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 275.8
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 273.7
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 262.2
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 257.4
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 255.2
GTEX-T6MN-0726-SM-32PML 50-59 years, male 253.7
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 248.7
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 238.0
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 236.5
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 236.4
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 235.6
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 231.7
GTEX-QEL4-2126-SM-447AE 50-59 years, male 231.3
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 224.6
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 223.9
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 218.6
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 214.2
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 210.0
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 202.8
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 201.5
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 200.5
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 199.0
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 197.1
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 195.2
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 191.7
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 190.8
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 190.8
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 188.3
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 186.9
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 185.2
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 181.7
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 181.4
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 176.9
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 173.8
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 170.3
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 170.3
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 165.7
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 158.7
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 156.6
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 154.9
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 154.5
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 147.7
GTEX-R53T-1526-SM-48FEK 50-59 years, female 143.1
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 139.8
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 138.6
GTEX-117XS-1926-SM-5GICO 60-69 years, male 138.2
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 136.2
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 133.7
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 133.2
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 128.5
GTEX-1122O-1226-SM-5H113 60-69 years, female 127.3
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 123.5
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 123.5
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 121.7
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 121.5
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 118.7
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 116.0
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 113.0
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 112.4
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 112.4
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 108.9
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 98.3
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 91.8
GTEX-QVJO-1826-SM-447C9 60-69 years, female 91.5
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 91.2
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 91.1
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 90.9
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 88.9
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 87.3
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 87.3
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 86.6
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 85.3
GTEX-111YS-1926-SM-5GICC 60-69 years, male 82.9
GTEX-1192X-2326-SM-5987X 50-59 years, male 82.5
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 81.5
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 77.6
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 77.1
GTEX-13113-1726-SM-5GCOO 60-69 years, female 76.2
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 75.2
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 74.6
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 74.4
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 73.5
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 73.2
GTEX-11P81-1926-SM-5BC53 30-39 years, female 71.7
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 70.7
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 69.0
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 67.8
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 67.0
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 66.2
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 65.6
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 63.8
GTEX-X261-0626-SM-3NMD9 50-59 years, male 63.3
GTEX-S341-1526-SM-4AD6K 40-49 years, female 63.0
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 62.0
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 59.6
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 59.0
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 58.7
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 58.5
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 57.7
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 57.6
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 55.3
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 54.0
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 53.8
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 53.1
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 52.2
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 52.1
GTEX-11OF3-1926-SM-59889 60-69 years, male 51.8
GTEX-11EI6-0626-SM-5985T 60-69 years, male 51.0
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 51.0
GTEX-TML8-1226-SM-32QON 40-49 years, female 46.9
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 46.8
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 45.4
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 42.6
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 41.8
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 41.8
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 41.8
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 41.4
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 40.8
GTEX-14753-2426-SM-5LU8U 60-69 years, male 40.5
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 40.5
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 40.3
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 39.6
GTEX-RU72-0626-SM-46MUI 50-59 years, female 39.5
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 39.1
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 36.4
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 35.9
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 35.5
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 35.5
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 34.8
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 34.1
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 33.8
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 33.6
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 33.3
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 32.8
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 32.4
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 31.6
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 31.5
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 28.0
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 27.1
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 24.6
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 24.3
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 21.7
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 20.7
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 20.2
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 18.7
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 18.2
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 17.7
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 17.6
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 17.1
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 16.7
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 15.8
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 12.3
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 11.8
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 9.0
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 4.7
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

191.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 191.9
FF:10080-102A8 77 years, female 191.9

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