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NLGN1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1.1TPM
GTEx:0.5RPKM
FANTOM5:4.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA006680

  

Glandular cells

 Not detected  
 

COLON - HPA RNA-seq

Average TPM

1.1
overview Male, age 54 Sample 1
TPM: 1.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 1.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.8
Samples: 149

Max RPKM: 1.7
Min RPKM: 0.2
Std RPKM: 0.2
Median RPKM: 0.8
GTEX-13QBU-2026-SM-5KLZB 40-49 years, female 1.7
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 1.6
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 1.5
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 1.4
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 1.4
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 1.3
GTEX-13111-1926-SM-5GCOL 50-59 years, male 1.3
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 1.3
GTEX-X4EO-2726-SM-4E3HS 60-69 years, female 1.3
GTEX-ZA64-1426-SM-5CVMC 20-29 years, male 1.3
Show all
Colon - Transverse
RPKM: 0.3
Samples: 196

Max RPKM: 1.4
Min RPKM: 0.0
Std RPKM: 0.3
Median RPKM: 0.2
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 1.4
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 1.3
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 1.3
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 1.2
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 1.2
GTEX-Y114-1526-SM-4TT79 50-59 years, female 1.2
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 1.1
GTEX-OXRL-1426-SM-3NM9E 50-59 years, male 1.1
GTEX-117YX-0826-SM-5H11J 50-59 years, male 1.0
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 1.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

4.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 4.1
FF:10014-101C5 62,83,84 years, mixed 4.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.