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CHD3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:24.2TPM
GTEx:34.0RPKM
FANTOM5:19.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:Medium
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA043368

  

Endothelial cells

 High  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 High  
 
 

COLON - HPA RNA-seq

Average TPM

24.2
overview Male, age 54 Sample 1
TPM: 28.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 31.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 26.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 28.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 21.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 23.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 23.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 15.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 26.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 14.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 25.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 28.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 19.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

34.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 42.6
Samples: 149

Max RPKM: 75.7
Min RPKM: 23.2
Std RPKM: 9.8
Median RPKM: 42.0
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 75.7
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 68.4
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 67.2
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 66.6
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 62.9
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 62.6
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 62.6
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 61.3
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 60.8
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 60.5
Show all
Colon - Transverse
RPKM: 27.5
Samples: 196

Max RPKM: 63.1
Min RPKM: 9.6
Std RPKM: 11.8
Median RPKM: 25.2
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 63.1
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 61.2
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 57.1
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 55.6
GTEX-Y114-1526-SM-4TT79 50-59 years, female 52.2
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 51.9
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 50.7
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 50.0
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 49.4
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 48.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

19.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 19.3
FF:10014-101C5 62,83,84 years, mixed 19.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.