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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:32.3TPM
GTEx:16.3RPKM
FANTOM5:123.1Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA016026

  

Adipocytes

 Low  

Chondrocytes

 Medium  

Fibroblasts

 Medium  

Peripheral nerve

 Not detected  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Medium
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA016026

  

Adipocytes

 Low  

Fibroblasts

 Medium  

Peripheral nerve

 Not detected  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

32.3
N/A Female, age 80 Sample 1
TPM: 38.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 38.4
N/A Female, age 57 Sample 3
TPM: 35.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 21.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 28.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

16.3

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 17.6
Samples: 350

Max RPKM: 53.7
Min RPKM: 3.7
Std RPKM: 7.0
Median RPKM: 16.3
GTEX-ZT9X-1926-SM-57WE7 40-49 years, male 53.7
GTEX-Y114-2326-SM-4TT7X 50-59 years, female 39.7
GTEX-O5YT-0226-SM-32PK5 20-29 years, male 39.6
GTEX-QV31-1326-SM-2S1QE 30-39 years, male 39.5
GTEX-PWCY-1926-SM-3NB25 20-29 years, female 39.0
GTEX-O5YV-0226-SM-48TBY 60-69 years, female 38.9
GTEX-14BMU-2126-SM-5S2TS 20-29 years, female 38.6
GTEX-XUYS-0226-SM-47JX1 50-59 years, male 35.6
GTEX-S7SF-1826-SM-3K2AD 20-29 years, female 35.5
GTEX-QESD-1526-SM-2S1QT 20-29 years, male 35.2
Show all
Adipose - Visceral (Omentum)
RPKM: 14.2
Samples: 227

Max RPKM: 43.6
Min RPKM: 4.0
Std RPKM: 7.8
Median RPKM: 12.4
GTEX-139YR-0326-SM-5J1MC 50-59 years, male 43.6
GTEX-WFJO-1026-SM-3GIKL 30-39 years, male 42.8
GTEX-111YS-1326-SM-5EGGK 60-69 years, male 40.8
GTEX-13111-0626-SM-5LZVR 50-59 years, male 40.8
GTEX-ZF2S-1526-SM-5S2OO 50-59 years, female 38.7
GTEX-13N1W-1226-SM-5K7UM 70-79 years, male 36.7
GTEX-13O21-3126-SM-5J1OI 50-59 years, male 35.6
GTEX-XV7Q-1726-SM-4BRUU 40-49 years, female 34.5
GTEX-ZF29-0826-SM-5S2NP 60-69 years, female 33.7
GTEX-13OVJ-0926-SM-5K7U1 50-59 years, female 31.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

123.1

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 123.1
FF:10010-101C1 65,65,76 years, mixed 123.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.